Pairwise Alignments

Query, 325 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 325 a.a., polysaccharide deacetylase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  247 bits (630), Expect = 3e-70
 Identities = 132/318 (41%), Positives = 187/318 (58%), Gaps = 7/318 (2%)

Query: 4   NYGVFTISLDFEMYWGVRDKRAISDYAVNLEGIRPAIAGMLDIFTEFNVHATWATVGFLF 63
           N  VFTISLDFE+YWG+ DK  + D     E  R  I  ML +F +  VH TWATVG LF
Sbjct: 3   NIPVFTISLDFELYWGIFDKVPLKDRYQYFENTRKVIPQMLHLFEQEQVHVTWATVGMLF 62

Query: 64  FRNSEHLSANLPKAIPTYTDINLSPY--EYIKNKKLDDRYHFAPDLIQKIISTSGQEVAS 121
             +    SA  P   P Y++  LS Y  + +  K   + Y FAP+L++K+  T  QE+A+
Sbjct: 63  ANDWPDWSALAPAEKPAYSNKKLSAYSQQELHGKAELEPYFFAPELVKKVADTPYQEMAT 122

Query: 122 HTFSHYYCLEDGQTIDQFESDLALAVDTASRLGYKLSSLVFPRNQWNSEYLSVLNKYNIK 181
           HTFSHYYC E GQT++QF SD+  A   A+R+G  + SLVFPRNQ+N +YL V  +  I 
Sbjct: 123 HTFSHYYCKEPGQTVNQFRSDIRAAKHVAARIGAPMRSLVFPRNQYNQDYLKVCFEEGIT 182

Query: 182 SFRGNELNWMNSASGQEGQSYFKRAARLLDSYINISGFNTHDISTCLE--NKPFNFPSSR 239
           S R N  +W    + ++   +  +  R  D Y+ +    +  +S+  +  N P + P+SR
Sbjct: 183 SVRSNPKDWFWQDTVED--KFLNKVFRTGDGYLPLGQRASFPLSSLTKEPNLPLSIPASR 240

Query: 240 FLRPYNKKLSFFDCLKLRRIKKAMTHAAKNNELFHLWWHPHNFGAETSKNLDMLREILDH 299
           FLRP   K S  + L+L+RI   M+ AAK  E +HLWWHPHNFG    +++  L+ I+ H
Sbjct: 241 FLRPVGSK-SILNKLRLKRILSEMSEAAKRKECYHLWWHPHNFGGYPEQSMADLKVIIGH 299

Query: 300 YQYLNKNFGMRSLNMEEL 317
           Y+ L K + M S+ M+E+
Sbjct: 300 YKKLQKEYDMVSMTMQEI 317