Pairwise Alignments

Query, 453 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 573 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  104 bits (259), Expect = 9e-27
 Identities = 85/292 (29%), Positives = 136/292 (46%), Gaps = 28/292 (9%)

Query: 181 LEAQVELRTQELETALSDLRSTQHHLIENEKMAALGSLVAGVAHEVNTPLGIAVTSVT-- 238
           +E ++    +  E  L +LR TQ  LI  EKMA+LG L AG+AHE+  PL          
Sbjct: 275 IEDELRQAKERAEAILKELRETQQQLIVQEKMASLGQLTAGIAHELKNPLNFVNNFAELS 334

Query: 239 -HCLDEVALLKAAFEQNELDEDKFLTFINTMQDGLGLIERNLTRAAELVHNFKRTAADQS 297
              LDE  LL+     N+  E    T ++ + D L   + NL + A+  H  +     +S
Sbjct: 335 GELLDE--LLELLEPLNDHLEGATRTDVDDLVDSL---QSNLRKIAD--HGRRADNIVKS 387

Query: 298 VLERER--------FNLKAYLFQIFSSLRPLMRKKNIALTVELDEQIF-----IESYPGA 344
           +L   R         +L A + +  +     +R ++ +    LD +       ++  P  
Sbjct: 388 MLAHSRGGGGEWQSTDLNALVEEALALSYHAVRAQDRSFNATLDRRFDTAVGEVKLVPQD 447

Query: 345 IAQIFTNLVANSFRHGFPEHFTG-----DKKITIRVEKQGSNICMQYQDNGVGMTDEVKI 399
           I+++  NL  NSF     +  T      +  +TI  E +G ++ ++ +DNG+GMT  V  
Sbjct: 448 ISRVLVNLFTNSFYAVRKKQLTCGNPAYEPALTITTETRGLDVSIRIRDNGIGMTTAVIE 507

Query: 400 KAFEPFFTTARKDGGTGLGMSIIYNLVTQKLHGSILLTSQPNQGVTIDIQLP 451
           K F PFFTT     GTGLG+S+ Y++V  +  G   ++S  N+     I LP
Sbjct: 508 KLFTPFFTTKPTGEGTGLGLSLSYDIVVHQHRGRFDVSSVENEHAEFTITLP 559