Pairwise Alignments

Query, 130 a.a., DNA-binding protein, H-NS family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 112 a.a., H-NS family nucleoid-associated regulatory protein from Paraburkholderia sabiae LMG 24235

 Score = 41.6 bits (96), Expect = 4e-09
 Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 6/77 (7%)

Query: 54  RNAKIEEIRQQMEAVGLSIDDLGGVAVKASSKKRAPRPAKYQIEVDGEVIQWTGQGRMPT 113
           R++ +  +R++M  VG+ +DDL     +   +++A   A+Y+    GE   W+G G MP 
Sbjct: 6   RDSMVAYLRRRMAEVGIELDDLAAAIAEDQIRQKA---ARYR-SATGE--SWSGDGEMPQ 59

Query: 114 VFKNEVNKGRSMDDFLI 130
             K  ++ G++++ F +
Sbjct: 60  WLKQAISAGQTLEHFTV 76