Pairwise Alignments

Query, 130 a.a., DNA-binding protein, H-NS family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 135 a.a., DNA-binding transcriptional regulator H-NS from Pectobacterium carotovorum WPP14

 Score = 84.0 bits (206), Expect = 7e-22
 Identities = 49/136 (36%), Positives = 80/136 (58%), Gaps = 7/136 (5%)

Query: 1   MSEFLEILTHGRRFKAAVKDLSVEELRDLAAKLDKILVERESMEAEELQAIAARNAKIEE 60
           MSE L+IL + R  +A  ++ +++ L ++  KL+ ++ ER   +++    +  R  K+++
Sbjct: 1   MSEALKILNNIRTLRAQARECTLDTLEEMLEKLEVVVNERREEDSQVQAEVEERARKLQQ 60

Query: 61  IRQQMEAVGLS----IDDLGGVAVKASSKKRAPRPAKYQ-IEVDGEVIQWTGQGRMPTVF 115
            R  + A G+     +  LG V V A   KRA RPAKYQ  + +GE+  WTGQGR P V 
Sbjct: 61  YRDMLIADGIDPNELLQSLGSVKV-AGKSKRAARPAKYQYTDENGELKTWTGQGRTPAVI 119

Query: 116 KNEV-NKGRSMDDFLI 130
           K  +  +G+S+DDFL+
Sbjct: 120 KKAIEEQGKSLDDFLL 135