Pairwise Alignments

Query, 130 a.a., DNA-binding protein, H-NS family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 137 a.a., DNA-binding protein H-NS from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 82.0 bits (201), Expect = 3e-21
 Identities = 48/135 (35%), Positives = 80/135 (59%), Gaps = 5/135 (3%)

Query: 1   MSEFLEILTHGRRFKAAVKDLSVEELRDLAAKLDKILVERESMEAEELQAIAARNAKIEE 60
           MSE L+IL + R  +A  ++ ++E L ++  KL+ ++ ER   E+     +  R  K+++
Sbjct: 1   MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQ 60

Query: 61  IRQQMEAVGLSIDDL--GGVAVKASSK-KRAPRPAKYQ-IEVDGEVIQWTGQGRMPTVFK 116
            R+ + A G+  ++L     A K+ +K KRA RPAKY  ++ +GE   WTGQGR P V K
Sbjct: 61  YREMLIADGIDPNELLNSMAAAKSGTKAKRAARPAKYSYVDENGETKTWTGQGRTPAVIK 120

Query: 117 NEV-NKGRSMDDFLI 130
             +  +G+ ++DFLI
Sbjct: 121 KAMEEQGKQLEDFLI 135