Pairwise Alignments

Query, 130 a.a., DNA-binding protein, H-NS family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 133 a.a., DNA-binding protein H-NS from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 78.2 bits (191), Expect = 4e-20
 Identities = 45/133 (33%), Positives = 75/133 (56%), Gaps = 3/133 (2%)

Query: 1   MSEFLEILTHGRRFKAAVKDLSVEELRDLAAKLDKILVERESMEAEELQAIAARNAKIEE 60
           M+  L+ L + R  +A  ++ S++ L ++  K   +  ER   E  + + +A +  KI  
Sbjct: 1   MNLMLQNLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEEELQQRQLAEKQEKINA 60

Query: 61  IRQQMEAVGLSIDDLGGV--AVKASSKKRAPRPAKYQI-EVDGEVIQWTGQGRMPTVFKN 117
             + M+A G++ ++L  +  A+  S+KKR PRPAKY+  + +GE   WTGQGR P     
Sbjct: 61  FLELMKADGINPEELFAMDSAMPRSAKKRQPRPAKYRFTDFNGEEKTWTGQGRTPKPIAQ 120

Query: 118 EVNKGRSMDDFLI 130
            +  G+S+DDFLI
Sbjct: 121 ALAAGKSLDDFLI 133