Pairwise Alignments

Query, 130 a.a., DNA-binding protein, H-NS family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 135 a.a., DNA-binding transcriptional regulator H-NS from Dickeya dadantii 3937

 Score = 86.3 bits (212), Expect = 1e-22
 Identities = 51/135 (37%), Positives = 80/135 (59%), Gaps = 5/135 (3%)

Query: 1   MSEFLEILTHGRRFKAAVKDLSVEELRDLAAKLDKILVERESMEAEELQAIAARNAKIEE 60
           MSE L+IL + R  +A  ++ S+E L ++  KL+ ++ ER   E +    I  R  K+++
Sbjct: 1   MSEALKILNNIRTLRAQARECSLETLEEMLEKLEVVVNERREEENQAQAEIEERTRKLQQ 60

Query: 61  IRQQMEAVGLSIDDL---GGVAVKASSKKRAPRPAKYQ-IEVDGEVIQWTGQGRMPTVFK 116
            R+ + A G+  ++L    G +  A   KRA RPAKYQ  + +GE+  WTGQGR P V K
Sbjct: 61  YREMLIADGIDPNELLQSLGSSKVAGKAKRAARPAKYQYTDENGELKTWTGQGRTPAVIK 120

Query: 117 NEV-NKGRSMDDFLI 130
             +  +G+S+DDFL+
Sbjct: 121 KAIEEQGKSLDDFLL 135