Pairwise Alignments

Query, 130 a.a., DNA-binding protein, H-NS family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 137 a.a., global DNA-binding transcriptional dual regulator H-NS from Escherichia coli BL21

 Score = 86.7 bits (213), Expect = 1e-22
 Identities = 51/135 (37%), Positives = 83/135 (61%), Gaps = 5/135 (3%)

Query: 1   MSEFLEILTHGRRFKAAVKDLSVEELRDLAAKLDKILVERESMEAEELQAIAARNAKIEE 60
           MSE L+IL + R  +A  ++ ++E L ++  KL+ ++ ER   E+     +  R  K+++
Sbjct: 1   MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQ 60

Query: 61  IRQQMEAVGLSIDDL--GGVAVKASSK-KRAPRPAKYQ-IEVDGEVIQWTGQGRMPTVFK 116
            R+ + A G+  ++L     AVK+ +K KRA RPAKY  ++ +GE   WTGQGR P V K
Sbjct: 61  YREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDENGETKTWTGQGRTPAVIK 120

Query: 117 NEVN-KGRSMDDFLI 130
             ++ +G+S+DDFLI
Sbjct: 121 KAMDEQGKSLDDFLI 135