Pairwise Alignments

Query, 609 a.a., ABC transporter, ATP-binding/permease protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 590 a.a., ABC transporter transmembrane domain-containing protein from Rhodanobacter sp000427505 FW510-R12

 Score =  251 bits (641), Expect = 6e-71
 Identities = 178/510 (34%), Positives = 279/510 (54%), Gaps = 58/510 (11%)

Query: 116 SIRWLAHRYLLKQSVSFYQNDFAGRIATKVMQTSLAVRETVMKLLDVLVYILVYFTSMLV 175
           S+R   + ++++  V F++    G + +++     A  E V  L+   V + +    MLV
Sbjct: 104 SLRQTLYAHVIRLDVGFFEKSRVGELLSRLS----ADTEVVQALIGSGVSVALRSAVMLV 159

Query: 176 MVASADV----------RLVIPMLIWLALYIGLQWYFVPRLKTVSTEQ-ADARSTMTGRI 224
             A A V           LVIP ++   L  G +   V +L   S ++ ADA +     +
Sbjct: 160 GAAVAMVWTAPSLAGLTALVIPAVMLPILVFGRR---VQKLSRASQDRLADAAAIANETL 216

Query: 225 VDSYTNITTVKLFAHTDKEADYAKASMRSFLDTVYRQMRLVTGISVSVQIINYMLAFSIA 284
             S    T VK +A  D E+     ++   L T  R++ +   ++++V ++ +       
Sbjct: 217 NAS----TAVKAYAREDIESSRYGGAITRALATARRRIGMRALLTMAVIVLVF------G 266

Query: 285 AVSIALWSDN----AISVGA------IAIAVSLALRLNGMSQWIMW----EISSLFENIG 330
           A+++ LW+      A ++GA      +  AV  A  + G+S+  +W      +   E IG
Sbjct: 267 AITLVLWAGARHVLAGTLGAGVLGQFVLYAVFAAGSVAGLSE--VWGDVLRAAGAMERIG 324

Query: 331 TVTDGMNTLSKTTLIQDSPDANTLVVK-QGQIDFNQVSFHYGE--DAGVIDELNLNIKAG 387
            +      L +   I D      L    +G++ F+ V+FHY    D   + +  L +  G
Sbjct: 325 EL------LGERADIVDPRQPRALPQPMRGELRFDGVTFHYPTRPDTAALHDFTLTVHPG 378

Query: 388 EKVGLVGRSGAGKSTLVNLLMRFYDVEKGHICIDGQDIKAVKQDSLRSQIGMVTQDTSLL 447
           E V LVG SGAGKST+ +LL+RFYD + G I IDG D++      LR  I +V Q+T + 
Sbjct: 379 ETVALVGPSGAGKSTVFSLLLRFYDPQSGSIRIDGVDLRETTLAGLRGAIALVPQETVIF 438

Query: 448 HRTIRENILYGNPGASEIQLEHAIKQAQAHDFINELTDPNGNHGLDAQVGERGVKLSGGQ 507
             +  +NI +G   A + ++  A + A+AH+FI  L     +HG DA++GERGV+LSGGQ
Sbjct: 439 AGSAADNIRFGRQDAGDDEVREAARAAEAHEFIGAL-----DHGYDAELGERGVRLSGGQ 493

Query: 508 RQRVAIARVLLKNAPILLLDEATSALDSEVEAAIQESLYELMQGKTVIAIAHRLSTIAAM 567
           RQR+AIAR +L++AP+LLLDEATSALD++ EAAIQ++L  L QG+T + IAHRL+T+   
Sbjct: 494 RQRIAIARAILRDAPLLLLDEATSALDAQSEAAIQQALARLEQGRTTLVIAHRLATVQRA 553

Query: 568 DRLIVLDQGRIVEQGTHQELIAAGGIYAQL 597
           DR++V+D GRIV QGTH+ L+A GG+YA+L
Sbjct: 554 DRIVVMDGGRIVAQGTHESLLAEGGLYAEL 583