Pairwise Alignments

Query, 305 a.a., hemK family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 301 a.a., Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  198 bits (504), Expect = 1e-55
 Identities = 115/291 (39%), Positives = 170/291 (58%), Gaps = 9/291 (3%)

Query: 7   IGDMLRWAVSRFNDANVYYGHGTDNAWDEAIALVFHALHLPEEIGQQVILSN-LTSSEKH 65
           + ++L  A  R   A + YGHGT NA DEA  LV   L LP +     + ++ + ++E+ 
Sbjct: 3   LNELLTQAGQRLEAAQLAYGHGTTNAQDEAAWLVLWQLGLPLDSDLDALANHPIGTAEQT 62

Query: 66  KIVELIIRRVRERLPVPYLTNKARFAGLEFYVDERVLVPRSPIAEMIAN-RFGPWLYGKP 124
            +++L+ RR+  R P  YLT +A   G+ FYVD R +VPRS IAE++A     PWL  + 
Sbjct: 63  AVLDLVQRRIDTREPAAYLTGEAWLQGVPFYVDRRAIVPRSFIAELLAEGSIDPWLDDR- 121

Query: 125 VNRILDLCTGSGCIAIACAYEFDEAEVDALDISEDALDVAQVNVETLGVMDRVFPMQSDL 184
              +LDLCTG+G +A+  A  + E +V   DIS DAL VA++NV+   + +RV  ++SD 
Sbjct: 122 TRDVLDLCTGNGSLAVLAAMAYPEVQVTGADISPDALAVARINVDRHSLQNRVRLVESDG 181

Query: 185 FSAIPEGPQYDLIVSNPPYVDEEDIGDMPDEYHHEPAIGL----ASGRDGLDLTKRILAN 240
            +A P GP +DLI+ NPPYV    +  +P EY  EP + L    A G+DG+D  + +L +
Sbjct: 182 LAACP-GP-WDLILCNPPYVSARSMAALPPEYLAEPGLALDGNTAGGQDGMDFVRVLLRD 239

Query: 241 AAQYLTPTGILVVEVGNSMVHLMEQFPEVPFTWVNFENGGDGVFVLTRDQL 291
           A + L P G+LV+E+GN   H    FPE+   W+    G D V +LT + L
Sbjct: 240 ATRCLKPGGVLVLEIGNEREHFEAAFPELEAIWLETSAGDDQVLLLTLESL 290