Pairwise Alignments

Query, 305 a.a., hemK family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 310 a.a., putative adenine-specific methylase (VIMSS) from Escherichia coli BW25113

 Score =  400 bits (1029), Expect = e-116
 Identities = 196/303 (64%), Positives = 242/303 (79%), Gaps = 2/303 (0%)

Query: 1   MTELRTIGDMLRWAVSRFNDANVYYGHGTDNAWDEAIALVFHALHLPEEIGQQVILSNLT 60
           + EL+TI DMLRW+VSRF+ AN++YGHGTDN WDEA+ LV  +L+LP +I + +  + LT
Sbjct: 10  VNELQTIQDMLRWSVSRFSAANIWYGHGTDNPWDEAVQLVLPSLYLPLDIPEDMRTARLT 69

Query: 61  SSEKHKIVELIIRRVRERLPVPYLTNKARFAGLEFYVDERVLVPRSPIAEMIANRFGPWL 120
           SSEKH+IVE +IRRV ER+PV YLTNKA F G EFYVDERVLVPRSPI E+I N+F   L
Sbjct: 70  SSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDERVLVPRSPIGELINNKFAG-L 128

Query: 121 YGKPVNRILDLCTGSGCIAIACAYEFDEAEVDALDISEDALDVAQVNVETLGVMDRVFPM 180
             K    ILD+CTGSGCIAIACAY F +AEVDA+DIS DAL VA+ N+E  G++  V P+
Sbjct: 129 ISKQPQHILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPI 188

Query: 181 QSDLFSAIPEGPQYDLIVSNPPYVDEEDIGDMPDEYHHEPAIGLASGRDGLDLTKRILAN 240
           +SDLF  +P+  QYDLIV+NPPYVD ED+ D+P+EY HEP +GLASG DGL LT+RIL N
Sbjct: 189 RSDLFRDLPK-VQYDLIVTNPPYVDAEDMSDLPNEYRHEPELGLASGTDGLKLTRRILGN 247

Query: 241 AAQYLTPTGILVVEVGNSMVHLMEQFPEVPFTWVNFENGGDGVFVLTRDQLIEHQSLFAI 300
           AA YL   G+L+ EVGNSMVHLMEQ+P+VPFTW+ F+NGGDGVF+LT++QLI  +  FAI
Sbjct: 248 AADYLADDGVLICEVGNSMVHLMEQYPDVPFTWLEFDNGGDGVFMLTKEQLIAAREHFAI 307

Query: 301 YRD 303
           Y+D
Sbjct: 308 YKD 310