Pairwise Alignments

Query, 700 a.a., ferric alcaligin siderophore receptor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 827 a.a., TonB-dependent receptor from Pseudomonas simiae WCS417

 Score =  301 bits (772), Expect = 6e-86
 Identities = 221/698 (31%), Positives = 325/698 (46%), Gaps = 48/698 (6%)

Query: 35  YKTPAMNTATGLDLSYLETPQSVTSVTRQMMQDQQLNSVIEAMTSVAGINARPMDNDRYS 94
           Y T A+    G + S  ETPQSV+ +TRQ M DQ + ++ + M    GI           
Sbjct: 146 YTTGAVTIGKG-EHSLRETPQSVSVMTRQFMDDQNVTTIDDVMERTPGITTYESPMGGKY 204

Query: 95  ISSRGIAVTS-ILYDGVPTTYDTRFNYGDNL-IDTAIYERVEIVRGATGLMTGAGNPSAA 152
             SRG  +     YDGVP      +   D+   + AIY+RVE+++GA G++ GAG  S A
Sbjct: 205 FYSRGFKMLGQYQYDGVPLDMGKDYVQADSFSANMAIYDRVEVLKGAAGMLKGAGTASGA 264

Query: 153 INLVRKRPTQEFMGSTSVSVGSWNNLRGMVDLSSGLTDSGNIRGRVVAAYQDKESFQDRY 212
           +N VRKRP  +   S S+S G+W+N R  VD    L DSG +RGR   + Q + S+ D  
Sbjct: 265 VNFVRKRPQAKPTTSLSLSAGTWDNYRADVDTGGPLNDSGTLRGRAAVSQQTRGSYMDIA 324

Query: 213 QQQRTTLYGIVETDISDSTLLTLGADYQDTTPEATMS-GGLPLFHSDGSRTNYDRATSTA 271
           ++Q    YG ++ D++  T L +GA Y+D   +AT   GGLP + +DG   N  R+T   
Sbjct: 325 KRQDQAFYGALDFDLTPDTTLGVGASYEDV--DATPCWGGLPRY-ADGKSANLSRSTCLG 381

Query: 272 PDWASAHTQGLNSFASLEHRFDNGWELK--GTYSYGDNSLEYNVLWAT---GYPDPVTNL 326
             W    ++    FA + H F++ W+LK    +S      +Y     T   G P P  N 
Sbjct: 382 QSWNDWQSRRTTFFADVTHHFNDDWKLKVAAVHSRNLQDTKYAASEGTINYGNPAPTANS 441

Query: 327 GATAGSIAYIDGSRTQHNLDLRAQGMFALFGQEHQLTFGWTGQRQEFANPYYYPTAAVPP 386
            A     A +D       LD    G F  FG EH+L  G  G R        Y    +P 
Sbjct: 442 YA-----ALMDYDHKDFGLDAYVDGKFEAFGLEHELILGANGSRG--TQDDVYAIQNLPK 494

Query: 387 LGDFRDPNFQYPKPQ----WKETHTTGSFGET-EQSAAYVATQLNLTDALALLAGLRLNQ 441
                 P+  +P+P     W   +  G+  ET  Q   Y   +L L + L  + G R++ 
Sbjct: 495 RQSIYQPDHHFPEPDDNTFWPNMYRGGTVKETATQYGTYATLRLRLAEPLMFIVGSRVSW 554

Query: 442 WQT--DQNNFG----SLYDFNV--DNELTTYLGLTYALTEQYSLYASYTDIFAPQ-TLQR 492
           ++     NN      ++ D       E+T +  L Y L E  S+YASY DIF PQ +   
Sbjct: 555 YENRRQSNNLAWGEWAVQDARTKETGEVTPFAALIYDLDEHLSVYASYADIFQPQSSYAT 614

Query: 493 IDASYIDPVKGKNYEAGIKASLMDESLDMSLSVFEIRQDNVGERTGDVLPGTTIP--VYR 550
           +D + + P  G NYE GIK    D  L+ S+++F   + N  E     +  T+     Y 
Sbjct: 615 VDGAALKPKIGDNYELGIKGEWFDGRLNSSVALFRAIEKNGAESDYTTMCPTSADGYCYT 674

Query: 551 EVNGTQTQGFEFESTGKITDDWNIYFGYTQFSTDDPK-------GNRINTTSPRQQLKLF 603
           +    + QG E E +G++ +   ++ GYT   T   K       G   NT  PR  L+L+
Sbjct: 675 DTGKVRAQGVETEISGELLERLQLFGGYTYTQTKSLKNIDSQVEGGSSNTYVPRHMLRLW 734

Query: 604 TTYTFSGDWNKLQLGAGVNWQSRVYQTVNSPLGRVEVEQDSYALASLMTSYAFTEQLKLS 663
             Y   G   K  +GAGVN QS  Y+     +  +++EQ  YA  S   +Y   +   ++
Sbjct: 735 GDYQLDGALAKWSVGAGVNAQSSNYR-----VQTIKLEQAGYATWSARMAYRIDDTWTVA 789

Query: 664 ANVHNALDKTYYSQVGQYSQFQ-YGTPRSVSVNLDYRF 700
            N +N  DK+YY+ VG  S    YG PR+ +V+L   F
Sbjct: 790 LNGNNLFDKSYYNTVGTASWGNFYGEPRNFTVSLKGNF 827