Pairwise Alignments

Query, 700 a.a., ferric alcaligin siderophore receptor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 818 a.a., TonB-dependent siderophore receptor from Pseudomonas sp. SVBP6

 Score =  362 bits (928), Expect = e-104
 Identities = 250/702 (35%), Positives = 343/702 (48%), Gaps = 37/702 (5%)

Query: 24  VVGAKDLHDKRYKTPAMNTATGLDLSYLETPQSVTSVTRQMMQDQQLNSVIEAMTSVAGI 83
           V+G+       Y T  M TAT L L+  ETPQSVT +TRQ M DQ L S+ + + S  G+
Sbjct: 129 VLGSITEDSGSYTTGPMQTATKLALTIRETPQSVTVITRQRMDDQNLRSLEDVLKSTPGM 188

Query: 84  NARPMDNDRYSISSRGIAVTSILYDGVPTTYDTRFNYGDNLI-DTAIYERVEIVRGATGL 142
           +       R +  +RG  V +++ DG+        +   N   D AIY+ VE+VRGATGL
Sbjct: 189 SMTKDGPQRPTFYARGFTVENLMNDGLSNDLSHYLSRDMNSAPDMAIYDHVEVVRGATGL 248

Query: 143 MTGAGNPSAAINLVRKRPTQEFMGSTSVSVGSWNNLRGMVDLSSGLTDSGNIRGRVVAAY 202
           M GAG PSAAIN+VRKRPT +   S + S GSW+N R  VD S  L D+  +RGRVV AY
Sbjct: 249 MQGAGTPSAAINMVRKRPTADPRVSITASAGSWDNYRSEVDASGPLNDNATLRGRVVTAY 308

Query: 203 QDKESFQDRYQQQRTTLYGIVETDISDSTLLTLGADYQDTTPEATMSGGLPLFHSDGSRT 262
           Q + SFQD    +R+  Y I E D+SD++ LTLG   Q     AT  GGLP    DGS  
Sbjct: 309 QTRNSFQDVTDSERSVFYAIGEADLSDNSTLTLGVSNQRVNNTATW-GGLPT-AIDGSDL 366

Query: 263 NYDRATSTAPDWASAHTQGLNSFASLEHRFDNGWELKGTYSYGDNSLEYNVLWATGYPDP 322
           +  R T    DW          F+ L++RFDN W+L    S   + L+          D 
Sbjct: 367 HLSRKTYLGNDWEYWDQDNTTVFSRLDYRFDNDWKLLLAASRTWSDLKMLGTMTERMGDE 426

Query: 323 VTNLGATAGSIAYIDGSRTQHNLDLRAQGMFALFGQEHQLTFGWTGQRQEFANPYYYPTA 382
               G   G   Y D    Q + D  A G F L G+ H+L  G + +   F     Y   
Sbjct: 427 GEVFGQYLGQYHYDD---EQSSYDAYASGPFQLLGRTHELVVGASRRELTFEGKGNYSDD 483

Query: 383 AVPPLGDFRDPNFQYPKPQ-----WKETHTTGSFGETEQSAAYVATQLNLTDALALLAGL 437
           A+       DP    PK +     W +        ET Q+ AY+ T+ NL D L L+ G 
Sbjct: 484 AIGMDIYNWDPG-SLPKRELDLSYWHQDR------ETSQTGAYLTTRFNLADDLKLILGG 536

Query: 438 RLNQWQTD-QNNFGSL----YDFNVDNELTTYLGLTYALTEQYSLYASYTDIFAPQTLQR 492
           RL+ +  D +   GS      D++V   +T Y G+ Y L   +SLYASYTDIF PQ+   
Sbjct: 537 RLDWYDNDTRTRNGSRAPTGSDYSVTRHVTRYAGIIYDLDVHHSLYASYTDIFKPQSELD 596

Query: 493 IDASYIDPVKGKNYEAGIKASLMDESLDMSLSVFEIRQDNVGERTGDVLPGTTIPVYREV 552
              + I+P++GKNYE GIK    D SL+ S +VF I Q N  +          +P   E 
Sbjct: 597 AAGTAIEPMEGKNYELGIKGEYFDGSLNASAAVFRIDQQNRAKTLEINECSALVPSCAEA 656

Query: 553 NG-TQTQGFEFESTGKITDDWNIYFGYT-------QFSTDDPKGNRINTTSPRQQLKLFT 604
            G  +++G E E  G +   W +  GYT       + S    +G   +T  PR   K FT
Sbjct: 657 AGKLRSEGIELELNGTVLPGWELGAGYTFAQVKYVKDSNPANEGRLFDTDIPRHVFKAFT 716

Query: 605 TYTFSGDWNKLQLGAGVNWQSRVYQTVN---SPLGRVEVEQDSYALASLMTSYAFTEQLK 661
           TY   G+  + ++G G+  Q+++Y   N   +   R  +EQ +Y L  LM SY  +E L 
Sbjct: 717 TYQLPGELQRWKVGGGLYRQNQIYNKGNNFYATESRFRIEQQAYTLVDLMLSYQASEHLD 776

Query: 662 LSANVHNALDKTYYSQVG---QYSQFQYGTPRSVSVNLDYRF 700
           +  N++N  DK YY  +     Y    YG PR+  +   + F
Sbjct: 777 VRLNLNNVFDKKYYQSIAGNTAYGGNLYGDPRNFMLTTRWSF 818