Pairwise Alignments

Query, 223 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 250 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  109 bits (272), Expect = 5e-29
 Identities = 92/255 (36%), Positives = 119/255 (46%), Gaps = 51/255 (20%)

Query: 2   KQRPIIFNTEMVRAILDGRKTQTRRPINPQ-PEPDTETSKGGYWFPCHAFQSMVHVEDLQ 60
           K+RPI+F+  MVRAIL+GRKT TRRP+ P  P   TE       FP +A    V +  LQ
Sbjct: 5   KERPILFSGPMVRAILEGRKTVTRRPVKPGFPSSVTEV------FP-YAGAPHVWMPALQ 57

Query: 61  D-PLWLGMASDACQICSVGDQLWVRETF----------------------------QYGL 91
               W     + C     GD+LWVRET+                            ++G 
Sbjct: 58  SGEPWYEQVRE-CPYGRPGDRLWVRETWGVISHDFDQQGNRVDWDPDRPAKAIREMRFGR 116

Query: 92  CTKSGFAYKATHNPSDL---EEGWNEVIK-WKPSIHMPRSAARIILEVTDIRVERLNDIS 147
              SG    A   P +    E+G  +    WKPSIHMPR A RI+LEVTD+RVERL D  
Sbjct: 117 GYYSGHIVYAADGPCEWAGDEDGVGDPRSAWKPSIHMPRVAGRILLEVTDVRVERLQDGE 176

Query: 148 EQDAKAEGLQYSSIYQQWGGVEKHLSH----KPHSPHWRWYKNPQHAFKSLWNSI--YKN 201
            +           I +   G  +H  H     P   +W    +P  A++ LW SI    +
Sbjct: 177 GETDFESRYVPEGINRIHHGDGEHYYHPFKSDPGPGNW---ADPFDAWRELWVSINGADS 233

Query: 202 WDANHWVWVIEFKVI 216
           W+AN WVWV+EFK I
Sbjct: 234 WNANPWVWVVEFKRI 248