Pairwise Alignments

Query, 581 a.a., hypothetical phage terminase large subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 571 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 50.4 bits (119), Expect = 2e-10
 Identities = 79/322 (24%), Positives = 123/322 (38%), Gaps = 27/322 (8%)

Query: 92  WQAFIVGSLFGWKD-ADGTRRFRMCYVESGKGSGKSPLAAGIGLYGLVADGEASAEIYAA 150
           W   IV + FG  D   G R     +    K +GK+  AA +GL  L  +   + E    
Sbjct: 60  WMRDIVRAAFGSIDPVTGERFVGEIFNLVPKKNGKTTNAAALGLLALQLNQRPNVEGVIV 119

Query: 151 ATKKDQAMVLFRDAVSMVNQSPQLSSRL-----KKSGTGQSVWNLAYLAKNSFFRPIS-S 204
              ++ A   F  A +M+   P L  R      KK+     V  L  + +N   +  S S
Sbjct: 120 GPTQEVADKCFAQAAAMIALDPYLKRRFDVIEHKKTILDLHVDPLTGVKRNVKLKITSFS 179

Query: 205 DNGQSGPRPHMALIDEVHEHK----NNNVVEMMRAGTKGRKQALIFMITN------SGHD 254
               +G  P  A++DE+HE       + V+  +R G     ++L+ +IT       +G  
Sbjct: 180 PKVVTGSIPAFAIVDELHEMAAASFASRVLGQIRGGMITNPESLLIIITTQSATPPAGVF 239

Query: 255 RTSVCYSYHEYGKAICAGTKEDDSFFAFICSLDEGD-DPINDESCWQKANPSLGHTFTHK 313
           +  + Y+       I  G +     + F   +   +  P  D   W    P+LG + T +
Sbjct: 240 KDELTYARGVRDGTITEGVRMLPILYEFSEKMQTAEHKPWADPKNWPMVLPNLGRSLTIE 299

Query: 314 YLREQ--VTQAKG-MPAKESIVRRLNF-CQWVDSASPWLSADTWMDCEDDF----DISEL 365
            L ++    Q KG   A+E   + LN           W+ AD W    D       I E 
Sbjct: 300 RLAKEWRTAQEKGDQAAQEWASQHLNVQIGMAMHNDRWVGADFWPQAADPAITLDSIIET 359

Query: 366 YGEECYGGLDLSGTRDLTALAL 387
                 GG D+ G  DL  LA+
Sbjct: 360 SDVAVVGG-DIGGMDDLFGLAV 380