Pairwise Alignments

Query, 581 a.a., hypothetical phage terminase large subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 506 a.a., hypothetical protein from Acinetobacter radioresistens SK82

 Score =  183 bits (465), Expect = 1e-50
 Identities = 147/509 (28%), Positives = 242/509 (47%), Gaps = 33/509 (6%)

Query: 61  LAAANRAISFFPKVLRLSGGDHEGKPFNLLDWQAFIVGSLFGWKDADGTRRFRMCYVESG 120
           +    R I+F  +  +   G H G+P  L D+Q   +  ++     D         +   
Sbjct: 1   MTRGERVIAFIERYCKAPEGAHVGQPIVLEDFQKKFILDVY-----DNPHGTHTAILSIA 55

Query: 121 KGSGKSPLAAGIGLYGLVA-DGEASAEIYAAATKKDQAMVLFRDAVSMVNQSPQLSSRLK 179
           + +GK+ L AGI L  L+  + + +++I + A  +DQA ++F+ AV M+N +  L   + 
Sbjct: 56  RKNGKTALIAGILLAHLIGPEAQQNSQIVSGALSRDQAAIVFKLAVKMINLNEALQDLVH 115

Query: 180 KSGTGQSVWNLAYLAKNSFFRPISSDNGQS-GPRPHMALIDEVHEHKN--NNVVEMMRAG 236
                 S   L  LAKN  FR +S++   + G  P +A++DE  + K   +  V+ +   
Sbjct: 116 II---PSTKTLVGLAKNVEFRALSAEGKTTHGLSPILAILDETGQVKGPQDEFVDAVVTA 172

Query: 237 TKGRKQALIFMI-TNSGHDRTSVCYSYHEYGKAICAGTKEDDSFFAFICSLDEGDDPIND 295
               +  L+ +I T +  D   +     +  K       ED      + +     D ++ 
Sbjct: 173 QGAHEAPLLMVISTQAATDADLLSIWIDDALKG------EDPKTVCHLYTTPMESDILDK 226

Query: 296 ESCWQKANPSLGHTFTHKYLREQVTQAKGMPAKESIVRRLNFCQWVDSASPWLSADTWMD 355
           ES W+ +NP+LG   +   +++   +A  MP+ E+  R LN  Q V + SP+++  TW  
Sbjct: 227 ES-WKLSNPALGKFRSEPDMQKLAEKASRMPSAENTFRNLNLNQRVSTVSPFIAKQTWDT 285

Query: 356 CEDDFDISELYG-EECYGGLDLSGTRDLTALALYFPRVKTLLVD--LWTPKDTLLDRERT 412
           C  +  +  +Y  +E + GLDLS   DLTA      +     V   +WTP   L DR + 
Sbjct: 286 CLGE--LPPIYECDEVWAGLDLSARTDLTACVFLGKKDNKFYVYPYIWTPSIGLDDRSKR 343

Query: 413 DNVPYSAWLRQGFIHAPPGHAVDYSFVAERIAELSALFEI-KSIGFDQYRIHYLEPELAE 471
           D VPY  +++QG +   PG  VDY FVA+ I E+++  +I  SI FD++RI   + E   
Sbjct: 344 DRVPYDLFVKQGHMFTTPGATVDYGFVAQMIGEIASELKILHSIAFDRWRIDVFKKECDL 403

Query: 472 ANVFIPLVKHGQGYYKASESNLWMPRSIELFEKLITSKEIRIKTNPCLRWNAASAVLEAD 531
             + +PLV  GQG+         M  +++  E  + +  I    NP L   AA+AV+  D
Sbjct: 404 IGLELPLVPFGQGFKD-------MSPALDTLEAELLNARIVHNDNPVLELAAANAVVVKD 456

Query: 532 AKDNRIFTKKKSTGRIDGVVAAAMAVGTA 560
               R   K K+T RID +VA AMA G +
Sbjct: 457 PAGGRKLDKSKATNRIDPIVALAMACGVS 485