Pairwise Alignments

Query, 237 a.a., prophage LambdaSo, tail assembly protein K, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 247 a.a., phage tail protein from Escherichia coli ECRC98

 Score =  144 bits (363), Expect = 2e-39
 Identities = 83/228 (36%), Positives = 111/228 (48%), Gaps = 9/228 (3%)

Query: 8   AFSQHAASCYPNECCGLLIRQGNKAQYVKCENKATNKADEFVIDPQQYADIEELGAIIGI 67
           A   HA  C P E CG ++      +Y  C N +      F + P+ +   E  G I+ +
Sbjct: 7   AILAHARRCAPAESCGFVVSTPEGERYFPCVNISGEPEAYFRMSPEDWLQAEMQGEIVAL 66

Query: 68  CHSHPDASSKPSDRDRAMCEASGLPWHILSWPDGDLRTIVPTGERKSLLNRPFVHGVWDC 127
            HSHP      S+ DR +   S LPW ++          VP      L  R F HGV DC
Sbjct: 67  VHSHPGGLPWLSEADRRLQVQSDLPWWLVCRGTIHKFRCVP-----HLTGRRFEHGVTDC 121

Query: 128 YSCVRDWYSEVQQIHLPDFARQDGWWEGEQELYLDNFAKAGFVALPNINLADLQIGDVFL 187
           Y+  RD Y  +  I +PDF R+D WW   Q LYLDN    G   +P   L+  Q GDV L
Sbjct: 122 YTLFRDAY-HLAGIEMPDFHREDDWWRHGQNLYLDNLEATGLYQVP---LSSAQPGDVLL 177

Query: 188 MQIQSQRVNHAAVYVGEGKILHHLYGRLSRYDIYGGYWQRNTRLIVRH 235
               S   NHAA+Y G+G++LHH+  +LS+ + Y   WQR T  + RH
Sbjct: 178 CCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSLWRH 225