Pairwise Alignments

Query, 237 a.a., prophage LambdaSo, tail assembly protein K, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 247 a.a., phage tail protein from Escherichia coli ECRC98

 Score =  146 bits (368), Expect = 4e-40
 Identities = 84/228 (36%), Positives = 111/228 (48%), Gaps = 9/228 (3%)

Query: 8   AFSQHAASCYPNECCGLLIRQGNKAQYVKCENKATNKADEFVIDPQQYADIEELGAIIGI 67
           A   HA  C P E CG +I       Y+ C N +      F I P+ +   E  G I+ +
Sbjct: 7   AILAHARRCAPAESCGFVISTPEGEWYIPCVNISAEPEAYFRIAPEDWLRAEMQGEIVAL 66

Query: 68  CHSHPDASSKPSDRDRAMCEASGLPWHILSWPDGDLRTIVPTGERKSLLNRPFVHGVWDC 127
            HSHP      S+ DR +   S L W ++   +      VP      L  R F HGV DC
Sbjct: 67  VHSHPGGLPWLSEADRRLQIKSALSWWLVCRGEIHKFRCVP-----HLTGRRFEHGVTDC 121

Query: 128 YSCVRDWYSEVQQIHLPDFARQDGWWEGEQELYLDNFAKAGFVALPNINLADLQIGDVFL 187
           Y+  RD Y  +  I LPDF R+D WW   Q LYLDN    GF     ++L+  Q GD+ L
Sbjct: 122 YTLFRDAY-HLAGITLPDFVREDDWWRNGQNLYLDNMEATGFC---RVSLSRAQAGDILL 177

Query: 188 MQIQSQRVNHAAVYVGEGKILHHLYGRLSRYDIYGGYWQRNTRLIVRH 235
               +   NHAA+Y G G++LHHL  +LS+ + Y   WQR T  + RH
Sbjct: 178 CCFGASVANHAAIYCGNGELLHHLPEQLSKRERYSEKWQRRTHSVWRH 225