Pairwise Alignments

Query, 209 a.a., prophage LambdaSo, tail assembly protein I (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 203 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score =  161 bits (407), Expect = 9e-45
 Identities = 96/193 (49%), Positives = 116/193 (60%), Gaps = 13/193 (6%)

Query: 5   TTIKLSGSLASRFGRVHQRLLETGTTTEAFSALKNTLQGFELFIKEQAKLGLRYAIFRNG 64
           TTI L G L  +FGR  +  +   +  EA  AL   + GFE F+      G+ +A+FR  
Sbjct: 12  TTILLYGQLR-QFGRSFR--MAVSSPAEAVKALCVQIPGFERFLSNAKSRGIEFAVFRGK 68

Query: 65  RNTGMDEFELAGTNEIRIVPVISGSKRGGILQTILGAVMIVVGAY-----FGQGW----- 114
            N    E   AG   IRI P+++GSKRGG LQTI+GAV+IVVG       FG G      
Sbjct: 69  TNLAEKELGFAGGGNIRIAPIVTGSKRGGALQTIIGAVLIVVGLVITGGTFGAGTPFGSA 128

Query: 115 LVQAGVGLVAGGVVQMLSPQAKGLNGREAAENAPSYAFGGAVNTTAAGNPVGIGYGKRRI 174
           L+  G  +V GGV+QMLSPQA GL    A EN P YAFG A NTTA+GNPV +  G+RR 
Sbjct: 129 LIMMGGSMVLGGVIQMLSPQAGGLKTSAAPENTPGYAFGSAKNTTASGNPVSLCAGRRRW 188

Query: 175 GGAIISAGIYAED 187
           GGAIISA IYAED
Sbjct: 189 GGAIISAAIYAED 201