Pairwise Alignments

Query, 209 a.a., prophage LambdaSo, tail assembly protein I (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 269 a.a., Putative phage tail component from Escherichia coli ECRC98

 Score = 57.8 bits (138), Expect = 2e-13
 Identities = 55/184 (29%), Positives = 75/184 (40%), Gaps = 32/184 (17%)

Query: 29  TTTEAFSALKNTLQGFELFIKEQAKLGLRYAIFRNGRNTGMDEF------ELAGTNEIRI 82
           T  EA  AL   + GF   + E       Y I   G +T  +         L     I I
Sbjct: 3   TAAEAIRALSLQVPGFRRQMNEGW-----YQIRIRGEDTAPEAVYARLHEPLGEGAVIHI 57

Query: 83  VPVISGSKRGGILQTILGAVMIVVGAYFGQG-----W--------------LVQAGVGLV 123
           VP ++G+ +GG LQ +LGA  IV G++F  G     W              L   G  ++
Sbjct: 58  VPRLAGAGKGG-LQIVLGAAAIV-GSFFTAGASMAAWGAALSAGGFSATTMLFSLGASMI 115

Query: 124 AGGVVQMLSPQAKGLNGREAAENAPSYAFGGAVNTTAAGNPVGIGYGKRRIGGAIISAGI 183
            GGV QML+P+ K    R       +  F    N  A GNP+ + YG+  +G   IS  I
Sbjct: 116 LGGVAQMLAPKPKTPEYRATDNGKQNTYFSSLDNMIAQGNPMPVPYGEMLVGSRRISQDI 175

Query: 184 YAED 187
              D
Sbjct: 176 STRD 179