Pairwise Alignments

Query, 353 a.a., transcriptional regulator, AraC family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 362 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 67.0 bits (162), Expect = 7e-16
 Identities = 53/187 (28%), Positives = 91/187 (48%), Gaps = 11/187 (5%)

Query: 161 LLGLARELTGAEIRL--TQINLAEPVRD------GSFLSVATG-AKVQFNCEYYEWSISL 211
           ++G+   L G  I +  T++ ++ P ++      G  L + +G  +V+F+  Y    +  
Sbjct: 147 MIGMLCWLAGRRIAIDRTELAVSRPAQEDDLLLWGPDLRLGSGRTEVEFDSAYLRLPVVQ 206

Query: 212 NYLALDINYPFPEGTEITSLVSTTSLIETVLKAIRA-QFPDVPHLDEMAAQLHMSDRSFR 270
           +  AL           +    +   L+  V + +RA ++   P L  +A Q  +S  +FR
Sbjct: 207 DRAALKTFLRSAPQGLVIRFRNQNGLVAEVYRHLRALRYGQWPTLAALAQQQGISASTFR 266

Query: 271 RRLAQLGSSYQRLVDQVRCQRAVELILANELDIEAIAESLGYSDVSHFRQSFKHWIGHPP 330
           R+L + G SYQ++ D+VR   A E +    L I  IAE  G+ + S F ++FK W G  P
Sbjct: 267 RQLEREGRSYQQIKDEVRRAMAFERLREGALSIAEIAEQAGFQEPSAFHRAFKKWTGQSP 326

Query: 331 G-YFSRL 336
           G Y +RL
Sbjct: 327 GSYRARL 333