Pairwise Alignments

Query, 253 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 243 a.a., ABC transporter ATP-binding protein from Pectobacterium carotovorum WPP14

 Score =  234 bits (597), Expect = 1e-66
 Identities = 128/230 (55%), Positives = 163/230 (70%), Gaps = 2/230 (0%)

Query: 2   SNVVSKNSAINVVNLEKSVTTQEGSLTILKGINLDVKQGESVAILGPSGSGKSTLLGLLA 61
           S      + + V +L K V   E  L+IL G+ L VK  +++A++G SGSGKSTLLG+LA
Sbjct: 13  SKTAHVENILEVHHLSKHVGQGENRLSILTGVELIVKPAQTIALIGESGSGKSTLLGILA 72

Query: 62  ALDTPTAGEIWLDGEALSPLNEEQKAALRKQKVSFIFQSFMLVDTLTALENVMLPAELAG 121
            LD  T G++ L G++LS L+EE +AALR Q V F+FQSFMLV TL ALENV LPA L G
Sbjct: 73  GLDDGTEGDVSLMGKSLSALDEEGRAALRAQHVGFVFQSFMLVPTLNALENVQLPALLRG 132

Query: 122 VKNAKEK--AEAMLGRVGLSHRLTHLPKQLSGGEQQRVAIARAFICEPKVLFADEPTGNL 179
             ++  +  AE +L ++GL  RL HLP QLSGGEQQRVA+ARAF   P VLFADEPTGNL
Sbjct: 133 ESDSHSRGQAEQLLQQLGLGERLHHLPAQLSGGEQQRVALARAFSGRPNVLFADEPTGNL 192

Query: 180 DSVNGHKIADMLFELNQENHTTLILVTHDLQLAKRCQRQLVMDNGHLQEN 229
           D   G +I D+LF LN++  TTLILVTHD QLA RC+R+L + +G L+E+
Sbjct: 193 DRKTGERIVDLLFSLNRDYATTLILVTHDEQLAARCERRLRLVDGKLRED 242