Pairwise Alignments

Query, 220 a.a., signal peptidase I family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 248 a.a., prokaryotic type I signal peptidase from Agrobacterium fabrum C58

 Score =  111 bits (278), Expect = 1e-29
 Identities = 73/201 (36%), Positives = 113/201 (56%), Gaps = 15/201 (7%)

Query: 21  LMLVFRSAVADWNTVPTGSMLPTIVEGDRILVNKMAY---DVRVPFT----HIALVKLAD 73
           L +V R+ +    T+P+GSM+PT++ GD + VNK +Y      +PF+       +++ + 
Sbjct: 25  LAMVIRTVLFQPFTIPSGSMMPTLLVGDYLFVNKFSYGYSKYSLPFSPNLFSGRILEFSK 84

Query: 74  PVRGDIVVFD-SKNADKRLIKRVIAVPGDTVMMRDNRLYLNGEPLAYKPQA--LSPYAP- 129
           P RGD+VVF    N +   IKR++ +PGD V + +  L++NG+P+  +P     S Y   
Sbjct: 85  PKRGDVVVFRLPPNPEVDYIKRLVGLPGDRVQVTNGVLFINGQPVPKQPDGTFTSDYRAD 144

Query: 130 --AGVVEMQEDLLGIMHSIRLNQLP-SKLANFGPVTVPDEHYLALGDNRDNSADSRV-IG 185
               V   +E L   +    L+Q P S+  N     VP+ HY  +GDNRDNS DSR  +G
Sbjct: 145 PGTNVPVFRETLDNGVTYDTLDQSPDSRGDNTREFVVPEGHYFMMGDNRDNSLDSRFDVG 204

Query: 186 FVPRDEIVGRSSSLVFSLDYD 206
           FVP + ++GR+S + FSL  D
Sbjct: 205 FVPEENLIGRASVIFFSLGND 225