Pairwise Alignments

Query, 407 a.a., sodium/glutamate symporter (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 401 a.a., Sodium/glutamate symport protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  352 bits (904), Expect = e-102
 Identities = 191/414 (46%), Positives = 269/414 (64%), Gaps = 28/414 (6%)

Query: 5   YTIGELESFLIAIFVLFIGHSINRHVRVFKQYNIPEPIVGGLVVAAVIAFLHFQ-DITLA 63
           + +  L + + A  VL +G  + + V + K+Y IPEP+ GGL+VA  +  L       + 
Sbjct: 2   FELDTLSTLVAATLVLLLGRKLVQSVSLLKKYTIPEPVAGGLLVAVALLVLKKSVGWEVN 61

Query: 64  FSLPMQNTLMLMFFSTIGLSANYKLLLSGGKKVFIFLGVASVYIIIQNAVGVSLASLLGL 123
           F + +++ LML FF+TIGL+AN   L  GG+ V +FL V    +++QNA+G+ +ASLLGL
Sbjct: 62  FDMTLRDPLMLAFFATIGLNANLASLRKGGRVVGVFLVVVVGLLLMQNAIGIGMASLLGL 121

Query: 124 DPILGLIAGSITLSGGHGTGVAWSQTFAENYGI-NTLEFAMAAATFGLVMGGIIGGPVAQ 182
           DP++GLIAGSITLSGGHGTG AWS+ F E YG  +  E AMA ATFGLV+GG+IGGPVA+
Sbjct: 122 DPLMGLIAGSITLSGGHGTGAAWSKLFVERYGFASATEVAMACATFGLVLGGLIGGPVAR 181

Query: 183 RLISKHNLVSSYGVGRKHHATHPQLVTYDQLEED---------QVTAKTIIETLFVLLFC 233
            L+               H+T P  +  DQ              +T+  +IET+ ++  C
Sbjct: 182 YLVK--------------HSTTPDGMPDDQAVPTAFEKPDVGRMITSLVLIETIALIAIC 227

Query: 234 VAGAKWFTVLVSEYGLNWLKMPDFVYALFLGVVIANITEVTRGYKPHTESIDVIGTVALS 293
           +   K    L++      L++P FV  LF+GV+++N   +   Y+    ++ V+G V+LS
Sbjct: 228 LTVGKIVAQLLAG---TVLELPVFVCVLFVGVILSNGLALVGFYRVFERAVSVLGNVSLS 284

Query: 294 LFLSMALMNLKLWEILDLAIPLLIILVVQTAVLAVFAYFVTFKVMGSNYDAAVITGGHCG 353
           LFL+MALM+LKLWE+  LA+P+L ILVVQT  +A++A FVT+++MG NYDAAV+  GHCG
Sbjct: 285 LFLAMALMSLKLWELASLALPMLAILVVQTIFMALYAIFVTWRMMGKNYDAAVLAAGHCG 344

Query: 354 FGMGATPTAVMNMGALVSRTGPSPQAFMVVPIVGAFFIDIVNLIVLQGYLSFIM 407
           FG+GATPTA+ NM A+  R GPS  AF+VVP+VGAFFIDIVN +V++ YL   M
Sbjct: 345 FGLGATPTAIANMQAITDRFGPSHMAFLVVPMVGAFFIDIVNALVIKLYLMLPM 398