Pairwise Alignments

Query, 296 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 297 a.a., putative NAD-dependent nucleotide-sugar epimerase from Escherichia coli BL21

 Score =  287 bits (734), Expect = 2e-82
 Identities = 147/297 (49%), Positives = 197/297 (66%), Gaps = 4/297 (1%)

Query: 1   MKILITGASGFIGQQLVAHLANQ-HELLLLTRHPGSIRQLLGPQHQYLSSLDEIDDLNHI 59
           M I+ITG +G IG+ L+  L    H++ ++TR+P     +LGP+      L +  +LN +
Sbjct: 1   MNIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSVLGPRVTLWQGLADQSNLNGV 60

Query: 60  NAVINLAGEPIVAKRWSAQQKQHICDSRWNITARLSQLILQSNNPPQVMISGSAIGFYGR 119
           +AVINLAGEPI  KRW+ +QK+ +C SRWNIT +L  LI  S+ PP V+ISGSA G+YG 
Sbjct: 61  DAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINASDTPPSVLISGSATGYYGD 120

Query: 120 QGAIPIDEHAVPHSEFSHDICKEWERLALKATS-KTRVCILRTGIVLG-HGGALAKMLPP 177
            G + + E   PH+EF+H +C  WE +A +A S KTRVC+LRTG+VL   GG L KMLPP
Sbjct: 121 LGEVVVTEEEPPHNEFTHKLCARWEEIACRAQSDKTRVCLLRTGVVLAPDGGILGKMLPP 180

Query: 178 FKLGIGGPIGHGRQGMSWIHMHDMVALIEFLLCHQECHGIFNATAPYPVSNTEFSKTLGK 237
           F+LG+GGPIG GRQ ++WIH+ DMV  I +LL   E  G FN  +PYPV N +F+  LG 
Sbjct: 181 FRLGLGGPIGSGRQYLAWIHIDDMVNGILWLL-DNELRGPFNMVSPYPVRNEQFAHALGH 239

Query: 238 VLNRPAFMTTPVPVLRLAMGEMADLLTEGQFVLPKHALDAGFTFRFEQLEPALKDLL 294
            L+RPA +  P   +RL MGE + L+  GQ  LPK   +AGF FR+  LE AL D++
Sbjct: 240 ALHRPAILRVPATAIRLLMGESSVLVLGGQRALPKRLEEAGFAFRWYDLEEALADVV 296