Pairwise Alignments

Query, 303 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 338 a.a., SAM-dependent methyltransferase from Pseudomonas simiae WCS417

 Score =  115 bits (288), Expect = 1e-30
 Identities = 101/321 (31%), Positives = 148/321 (46%), Gaps = 41/321 (12%)

Query: 14  GEDAVRLFHGRGGHYAGCEHLCLDWFAPVLLLTSFIQ-LEEAELADCQQAITARWQALQP 72
           G D  RLFHG      G   L +D + P LL+ SF   LE AEL D  Q +    Q L  
Sbjct: 26  GSDCYRLFHGS---QEGAGGLTVDRYGPQLLVQSFHHPLETAELLDLHQQVN---QCL-- 77

Query: 73  NRPLNLVYQYRCGGETFSQLLTGEVPEQHIVTENRAKFQVHL---LRGQNHG----LFLD 125
              L LVY  R  G +           +    E+    +  L   +RG++ G    LFLD
Sbjct: 78  GLELLLVYNDRSRGNSRIDRDDTVYRAEPAALEDLVGHEWGLNYRVRGRHAGQDPLLFLD 137

Query: 126 MANGREWVRANARHKKILNLFAYTCGFSVAALQGGADEVVNMDMSKGALAIGKQNHLLND 185
           + N R WV+A++  K +LNLFAYTCG  ++A  GGA EV N+D ++G LA+G++N LLN 
Sbjct: 138 LRNTRGWVKAHSAGKSVLNLFAYTCGVGLSAAAGGAREVCNLDFAEGNLAVGRENGLLNP 197

Query: 186 FTAGARFLGHDIFKSWGKLRKL------------------GPYDIVVADPPSNQKGSFVA 227
                 F+  D F +  +L  L                    YD+V+ DPP+  K +F  
Sbjct: 198 QLPTMEFVQSDYFPAIRQLAGLPITQRRGQKLPSYPRLEQRQYDLVLLDPPAWAKSAFGT 257

Query: 228 T---KDYVRLIRHLPELLAENAEVLLCLNAPELDTQFLRQQV----EEAAPALEYLERLP 280
               +DY  L++      A+N  ++ C N  ++  +  R+ V    E+A   +   + + 
Sbjct: 258 VDLLRDYQSLLKPALLATADNGVLICCNNLAKVSMEDWREHVLRCAEKAGRPVRDWKVMT 317

Query: 281 NPAAFADVSQEKSLKVLRYRL 301
             A F    Q+  LK L  +L
Sbjct: 318 PGADFPSQDQQPPLKTLILQL 338