Pairwise Alignments

Query, 884 a.a., TonB-dependent receptor domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 936 a.a., TonB-dependent receptor, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  254 bits (648), Expect = 2e-71
 Identities = 246/929 (26%), Positives = 393/929 (42%), Gaps = 106/929 (11%)

Query: 1   MRANSTLTKAVRFALIGGATTAALSTMSVFAAEDDNA--KVERIEVTGSRIQRTDMESAL 58
           M  N+ L K+VRFALIGG    AL+   V AA++  A  KVERIEVTGSRI+RTDME+A 
Sbjct: 1   MHKNNLLAKSVRFALIGGVAATALNVPLVMAADEAGADKKVERIEVTGSRIKRTDMEAAS 60

Query: 59  PVTVLSAEDIAKTGLSDVSAVLAQMPFNTAGSFISDAGSSASNHASS-GMRGLGSNRTLT 117
           PV  ++ ++I  TG+  V  +L  +P   AGS ++ A ++  + +++  +R LGS R L 
Sbjct: 61  PVLSMNRDEIEATGMISVGDILQTIP--AAGSALNTAFNNGGDGSTNMDLRNLGSQRLLV 118

Query: 118 LINGRRIAPSATFGGDATNLNLIPMDAIERIEILRDGASAIYGSDAIGGVINIILKKTFD 177
           L+NG+R   S    G   +LN IP   IERI++L+DGASA+YGSDAI GV+NII +K F+
Sbjct: 119 LVNGKRWISSL---GSTVDLNTIPTSTIERIDVLKDGASAVYGSDAIAGVVNIITRKNFE 175

Query: 178 GLAFDAKFG-NPTQGGRDEKSASVTFGNTSDKSSSLVIIEHKQFDPLEGGQRPHLTANWD 236
           G+      G N       + +A  T G+ S+K   L  + H    P+  G R      + 
Sbjct: 176 GVEVSVYGGQNAKYDDGRQYTADFTVGSVSEKGGLLFNMAHVTQQPIWAGDRDISDTGYS 235

Query: 237 EKYGRSALYAPEGTYRPVASRPIKGADGTFSDPVYTGLQVPGKDCPADRIVTSKAGSACG 296
                + +   +G+    A++    A G            P      D +     G+  G
Sbjct: 236 STADNTRIRV-KGSQLNQANQDALAAIGK-----------PNSSGIYDYMSKEGTGANVG 283

Query: 297 FNHF------DGTDYLPD------QTKDSVFSNMTYRITDELEWFGQAIVMRDKS----- 339
            + F      D  ++ PD      Q ++S +    Y I+D L      ++   KS     
Sbjct: 284 MDQFRPRTGSDVYNFAPDNYLSTPQNRNSFYVQGFYDISDNLRVVSDFMMTNRKSSQELA 343

Query: 340 -----ITSSTALWTPNLYIAADNPLNPTFGTANASEVQA--------------YHRLKGV 380
                + +S       + I  +N  NP   T      +A                R+   
Sbjct: 344 PMPLTLGASFGAAASRVDIGGNNIYNPFGETLYGDSARAVANGKPVGYVPYALQRRMVEA 403

Query: 381 ADRTTEFDSNVVDVVTGLNLELDAGSLSWYVQY----------SDQIVNIETDSYVFEDK 430
             R    +      + GL   ++  + SW   Y          +  ++N+   +    D 
Sbjct: 404 GSRQYNQNDTTYRAMVGLEGNIN-DNWSWTASYIYGQNNQDVLTTGLLNLTRINQALGDN 462

Query: 431 LQEAVDKGLYNPFVEGGNATQATLDTFLHTATRKATSNTTGTGLSWAALAPI-SLPGGDL 489
              +      N F   G+ TQ  +D    T    + S  T    ++     +  LP G +
Sbjct: 463 CNASNGCVALNLFGGPGSVTQDMVDYI--TFDSVSRSGLTMKDYTFNIAGDLFDLPAGPV 520

Query: 490 GYAVGMEYQKIEYKDTRDAQQAAGNVLGTYGGDSAGDRSYKAAFVELELPVLDHLNVKLA 549
           G A G+E ++    DT D     G   G     ++G      A+ EL +PV++ L +  A
Sbjct: 521 GLAFGLERREESGFDTPDPLTVTGESSGNQRDATSGGFRLDEAYAELAIPVIESLLITPA 580

Query: 550 SR---YDQYSLPDVGQLSNSVNVRYEALDNLVLRASYGQGFRAPSLDDLLGEPATSYDYV 606
            R   +D Y     G+    V   +  +D+++LR ++ QG+RAPS+ DL    A SY   
Sbjct: 581 VRVSDHDAYGNNTTGK----VGAEFRPMDDMLLRGTWAQGYRAPSISDLYAGSADSYPTW 636

Query: 607 TDTTLCQSLPAD--QQKGNPAC---------EDTQYLRKSSGNKELEPEKSAQYSFGAVW 655
            D    +    +     G P C          +TQ       + +L+PE S  Y+FG V+
Sbjct: 637 NDPCNTRDSKGNVLNISGLPGCAGVPDGYRQANTQIRISQVSSPDLKPETSESYTFGTVY 696

Query: 656 NIT--ENIDFVVDYYNIEITDQVSYIDAQTIVDLEAIGG-LGAYDPNYIYVKRKADGTID 712
           N +  E  +F VDYYNI++ D +      TI    A G  + + D     + R + G I 
Sbjct: 697 NPSWLEGAEFTVDYYNIKVEDAIGRYGHTTIARECATGDKVSSCDK----IDRDSLGNIV 752

Query: 713 EIGAGNINMDGVQTSGLDVSFTSNFDLADLGTFKFAVEGTYALEYTEQASPIAKRYDVLG 772
           ++     N    +  G+D      F     G+FK +++  Y L         A      G
Sbjct: 753 DLRNFLQNAGTYEVEGIDFFTAYRFPETSFGSFKTSLDLAYVLGNEFDGEDRAGIQ--YG 810

Query: 773 TKGYPPLRFNTTFSYAIDDFSTSLIAKYI-----DSYDGETPQQQEVGTN--KQDFSSFT 825
             G+P L+ +    +A+ D+      +Y+     D Y  +         N  ++ FS++ 
Sbjct: 811 DGGFPELKGSLNIDWAMGDWDAHWKMRYVGELTSDFYANDPANYDFYKDNGYRETFSAYM 870

Query: 826 TWDLTFNYDFNSYG-NVTVGARNLFDAMP 853
             +++  Y+   Y   V++G  NLF   P
Sbjct: 871 VHNVSVGYNIEDYNTKVSLGINNLFATEP 899