Pairwise Alignments

Query, 884 a.a., TonB-dependent receptor domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 962 a.a., Outer membrane cobalamin receptor protein from Kangiella aquimarina DSM 16071

 Score =  238 bits (608), Expect = 1e-66
 Identities = 250/967 (25%), Positives = 416/967 (43%), Gaps = 124/967 (12%)

Query: 21  TAALSTMS----VFAAEDDNAKVERIEVTGSRIQRTDMESALPVTVLSAEDIAKTGLSDV 76
           TA LS +S    V AAE++ A  E I VTGSRI++   E A PVTVL  + +  TG   V
Sbjct: 17  TAVLSAVSFNNAVLAAEEEEA--ESIVVTGSRIRQAQAEGANPVTVLGRDYLENTGAKSV 74

Query: 77  SAVLAQMP---------FNTAGSF--ISDAGSSASNHASSGMRGLGSNRTLTLINGRRIA 125
             +LA++P         FN++G+F    D G   +  A   +R L + RTL L++G R  
Sbjct: 75  GDILARLPTAGSALNTRFNSSGNFGFPPDGGGVGAGAAQVSLRHLKAKRTLVLVDGIRWV 134

Query: 126 PSATFGG--DATNLNLIPMDAIERIEILRDGASAIYGSDAIGGVINIILKKTFDGLAFDA 183
             ++  G  ++ +LN IP+  I+RIEIL DGAS+IYGSDAI GV+NII +K F+G+ F+A
Sbjct: 135 NGSSGSGVSNSVDLNTIPISIIDRIEILEDGASSIYGSDAIAGVVNIITRKDFEGMEFNA 194

Query: 184 KFGNPTQGGRDEKSASVTFGNTSDKSSSLVIIEHKQFDPLEGGQRPHLTANWDEKYG--R 241
             G   +G  +     + FG + DK      + H   + ++  +R  L+A      G  R
Sbjct: 195 YHGMFDEGDGETSQFDLAFGASGDKHRVFFSLSHFDQEAVDSLER-ELSAVPVPNTGLTR 253

Query: 242 SALYAPEGTYRPV----ASRPIKGADGTFSDPVYTGLQVPGKDCPADRIVTSKAGSACGF 297
            +   P+G +  +        +   +G    P Y  L  PG       + T+       F
Sbjct: 254 GSSGTPQGRFVFIDPNDQVNDLTINNGVTGIPTY-DLSNPGGPNDDFHVFTNND----RF 308

Query: 298 NHFDGTDYLPDQTKDSVFSNMTYRITDELEWFGQAIVMRDKSIT------------SSTA 345
           N      Y+    + S+F    Y+++D + ++ +A+    +S+             + T 
Sbjct: 309 NFAAYNLYVTPSKRTSIFGQADYQLSDNVNFYTKALFNNRESVNRAAPEPLFLGPDAGTG 368

Query: 346 LWTPNLYIAADNPLNPTFGTANASEVQAYHR--LKGVADRTTEFDSNVVDVVTGLNLELD 403
                + I   NP NP   T + + +    R  L+G   R  + + + V V  GLN +  
Sbjct: 369 GLADTVSIHETNPYNPFGFTLDENNLIFIGRRPLEG-GPRVFKQNVDTVYVGFGLNGDFA 427

Query: 404 AGSLS--WYVQYS---DQIVNIETDSYVFE------------DKLQEAVDKGLYNPFVEG 446
           AG+ S  W + Y+   ++       SY                 L+  V   ++    +G
Sbjct: 428 AGNNSYFWDINYTHGKNEAKQTTYGSYNIRHIKNALGPLADCQALEGCVPLNIFGGQGDG 487

Query: 447 -GNATQATLDTFLHTATRKATSNTTGTGLSWAALAPISLPGGDLGYAVGMEYQKIEYKDT 505
            G  TQ  LD ++       + N   T  +  +     +P G   +A G+E ++      
Sbjct: 488 SGTITQEMLD-YIQPVMTDQSENVIDTLSANISGDLFEMPAGYFAFAAGVETREYSGFYQ 546

Query: 506 RDAQQAAGNVLGTYGGDSAGDRSYKAAFVELELPVL------DHLNVKLASRYDQYSLPD 559
            DA   AGN  G     ++G       + E ++P+L      + L + +A+R   YS   
Sbjct: 547 PDAIVVAGNSNGVPSTPTSGSYDVDEYYAEFKVPLLKDMAAAEELTLTMAARNSDYSTFG 606

Query: 560 VGQLSNSVNVRYEALDNLVLRASYGQGFRAPSLDDLLGEPATSYDYVTDTTLCQSLPADQ 619
             + +    + +   D LVLRAS  +GFRAPS+ +L    +   + +TD   C +    Q
Sbjct: 607 -SETTTKFGLLWRVTDELVLRASQSEGFRAPSIGELFVSDSRFDEPLTDR--CSNYLGTQ 663

Query: 620 QKGNPACE-----------DTQYLRKSSGNKELEPEKSAQYSFGAVWN--ITENIDFVVD 666
            + N  C+           + Q    + GN +L+ EKS    FG V++     NID++  
Sbjct: 664 YEFN--CQTLGVPDTYQQINQQVSVITGGNPDLDAEKSDSSMFGFVYSPAWVNNIDWMNS 721

Query: 667 ------YYNIEITDQVSYIDAQTIVDLEAIGGLGAYDPNYIYVKRKADGTIDEIGAGNIN 720
                 YY+ E+ D +   DAQ  +D        +Y  +   + R A GTI  I    +N
Sbjct: 722 FDIKGTYYSHEVRDAIEPEDAQFKIDQCVANPTSSYCDD---ITRTAGGTISSIDNRLVN 778

Query: 721 MDGVQTSGLDVSFTSNFDLADLGTFKFAVEGTYALEYTEQASPIAKRYDVLGTKGYPPLR 780
           +  + TSG D++F+      D G        T+  EY E    +  +       G P  +
Sbjct: 779 IGTIDTSGYDITFSYASPQYDWGRLSVNWSNTFVNEYVEDGRELVGKEQ--NNTGIPEWK 836

Query: 781 FNTTFSYAIDDFSTSLIAKYIDS--------YDGETPQ--------------QQEVGTNK 818
            +    +A++D++ +   +++DS         DG TP                + + TNK
Sbjct: 837 SSMNIGWALEDWAVNWTVRHVDSLTESCSDFLDG-TPDSLTALGLCSNPNTADESLSTNK 895

Query: 819 QDFSSFTTWDLTFNYDFNSYG-NVTVGARNLFDAMPAVNYSLGYPGYDTDTHNILGRVVF 877
            D ++++   +++  + +     +T G  N F+A P   YS    GYD   ++  G   +
Sbjct: 896 LDATTYSDIQVSYFPEVDGVDMELTFGINNAFNANPPACYSCSLNGYDPSVYDPEGSFSY 955

Query: 878 AGYKVKF 884
              K+KF
Sbjct: 956 LSVKMKF 962