Pairwise Alignments

Query, 884 a.a., TonB-dependent receptor domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 963 a.a., TonB-dependent receptor from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  189 bits (481), Expect = 5e-52
 Identities = 229/972 (23%), Positives = 377/972 (38%), Gaps = 136/972 (13%)

Query: 31  AAEDDNAKVERIEVTGSRIQRTDMESALPVTVLSAEDIAKTGLSDVSAVLAQMPFNTAGS 90
           +A+D    V  I VTGSRI R D  S  P+  ++A+D   TG   +  ++  +P  T   
Sbjct: 10  SADDQATDVGEIVVTGSRIARQDYRSTSPIVTVTAQDFQATGSVTIDTLINDLPQFTPSI 69

Query: 91  FISDAGSSASNHASSGMRGLGSNRTLTLINGRRIAPSATFGGDATNLNLIPMDAIERIEI 150
             +    S    A+  +R LGSNRTL L+NGRR+ PS + G  + ++NLIP   I+ IE+
Sbjct: 70  SSTSNNPSNGGQANINLRNLGSNRTLVLMNGRRVVPSNSDG--SVDVNLIPTALIKNIEV 127

Query: 151 LRDGASAIYGSDAIGGVINIILKKTFDGLAFDAKFGNPTQGGRDEKSASVTFGNTSDKSS 210
           +  GASA YGSDA+ GV N IL + F G+  DA++G   +     +S SVT G   D   
Sbjct: 128 ISGGASAAYGSDALAGVANFILDENFSGVQVDAQYGETDRSDGKTESYSVTVGGNFDDDR 187

Query: 211 SLVIIE------------HKQFDPLEG--GQRPHLTANWDEKYGRSALYAPEGTYRPVAS 256
             +++              + F  + G  G  P  +  +D     S   A    Y   A+
Sbjct: 188 GNMVLSLGRSTRDVIFNAARDFSAVSGPSGTSPLGSTIFDSNNLPS--LAAVRAYFGNAT 245

Query: 257 RPIKGADGTFSDP---VYTGLQVPGKDCPADRIVTSKAGSACGFNHFDGTDYLPDQTKDS 313
               GA G   D     YTG ++  K  P      +  G+   FN            + +
Sbjct: 246 LANTGAFGFNEDNSLFSYTG-KLNFKVPPGGGAEYTAPGANYTFNTGPLNYLQLPLDRYN 304

Query: 314 VFSNMTYRITDELEWFGQAIVMR---DKSITSSTALWTPNLYIAADNPLNP----TFGTA 366
           V+    Y+I D  E +  A+  +   D  + +S A  +    + A NP       T   A
Sbjct: 305 VYGGGRYKINDNAEVYANALFTQYQGDTELAASPAASSTGFRVPATNPFITADLRTLLNA 364

Query: 367 NASEVQAY---HRLKGVADRTTEFDSNVVDVVTGLNLELDAGSLSW-----YVQYSDQIV 418
            A+   ++    R   +  R +  + N+  + TG+  ++   + ++     Y + S+   
Sbjct: 365 RANPNGSFLLNKRFTALGGRHSIEEYNIYQITTGVRGQVPQSTWTYDVYGSYGRVSNTTT 424

Query: 419 NIETDSYVFEDKLQEAVDKGL------YNPFVEGGNATQATLDTFLHTATRKATSNTTGT 472
                S     +L +A D G       ++PF  G  A  A   +++  + R +T      
Sbjct: 425 QTGNVSRSSVQRLLDAADGGRSLCAGGFDPF--GVTALSAECVSYIGRSARNSTVTEQRV 482

Query: 473 GLSWAALAPISLPGGDLGYAVGMEYQKIEYKDTRDAQQAAGNVL------------GTYG 520
             +        LP G++  A+G +Y++ ++    D+  A  N +            G  G
Sbjct: 483 IEASLQGKAFDLPAGEVRVALGAQYRQDDFAFGADSSLAQQNAVTPHLGANGQPDGGNIG 542

Query: 521 GDS----------AGDRSYKAAFVEL------ELPVLDHLNVKLASRYDQYSLPDVGQLS 564
           G            +G  + K  F+E       +LP ++ L++ L  RY  YS    G  +
Sbjct: 543 GSEIAGFNPTPSLSGGTNSKELFIEALVPLLSDLPFVEQLDLNLGYRYADYSTAG-GTQA 601

Query: 565 NSVNVRYEALDNLVLRASYGQGFRAPSLDDLLGEPATSYDYV-------TDTTLCQSLPA 617
               + +     L  R  Y +  RAPS+ +L    +T++  +       T    C    +
Sbjct: 602 YRAELDWTVAGGLRARGGYSRSVRAPSIGELFATASTNFPSIGAPSATGTGGDPCDIRSS 661

Query: 618 DQQKGNPAC--------------------EDTQYLRKSSGNKELEPEKSAQYSFGAVWNI 657
            +Q  N A                      + Q   ++ GN  L  E S  +S G V+  
Sbjct: 662 FRQGSNAAAVRALCLAQGISPQAIDQYTFSNNQVESRTGGNPNLFEETSDSWSAGLVYQS 721

Query: 658 ------TENIDFVVDYYNIEITDQVSYIDAQTIVDLEAIGGLGAYDPNY--------IYV 703
                        +DYYNIEITD +  I A     L     +   +P +        ++ 
Sbjct: 722 QFASPWLSGFSASIDYYNIEITDAIGSIAADD--SLAGCFNVTGENPTFSNANSYCQLFS 779

Query: 704 KRKADGTIDEIGAGNINMDGVQTSGLDVSFTSNFDLADL-----GTFKFAVEGTYALEYT 758
           +    G I        N+  ++TSG+D      F++AD+     G  KF    ++   Y 
Sbjct: 780 RDPLSGNITGAIENQANLGMIRTSGVDFQADWAFNIADIGGGDWGRLKFNTVISWLENYE 839

Query: 759 EQASPIAKRYDVLGT------KGYPPLRFNTTFSYAIDDFSTSLIAKYIDSYDGETPQQQ 812
           +         D  GT        +P  +  T+ ++A   FS     + +    GE     
Sbjct: 840 DNVVEGGAFTDRTGTIDSSFGNTFPEWKALTSVTWASGPFSVGARWRRV----GEI---- 891

Query: 813 EVGTNKQDFSSFTTWDLTFNYDFNSYGNVTVGARNLFDAMPAVNYSLGYPGYDTDTHNIL 872
            V    +   S   +DL  ++  N   ++  G  NL D  P V         D  T+++L
Sbjct: 892 TVINTTEVLPSIDYFDLNGSWSINDTVSLRGGVNNLTDEQPNVFVPGVQANTDPSTYDVL 951

Query: 873 GRVVFAGYKVKF 884
           GR  + G   KF
Sbjct: 952 GRRYYVGLTAKF 963