Pairwise Alignments

Query, 884 a.a., TonB-dependent receptor domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 994 a.a., TonB-dependent receptor from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  201 bits (512), Expect = 1e-55
 Identities = 241/1029 (23%), Positives = 399/1029 (38%), Gaps = 194/1029 (18%)

Query: 8   TKAVRFALIGGATTAALSTMSVFAAE----------DDNAKVERIEVTGSRIQRTDMESA 57
           ++ V  +++ G T  A +T    AA+          +  A++E + VTGSRI R D  + 
Sbjct: 8   SRLVASSVLTGITIVATATALPVAAQNRPSSETSSSEPAAELEAVVVTGSRIARQDYIAN 67

Query: 58  LPVTVLSAEDIAKTGLSDVSAVLAQMPFNTAGSFISDAGSSASNHASSGMRGLGSNRTLT 117
            P+  ++ ED   TG  ++ +++ ++P  TA    +    + +  A+  +RGLGS RTL 
Sbjct: 68  SPIVTVTQEDFQATGSVNIESLINELPQFTALGNAASNSPNLAGQANVQLRGLGSTRTLV 127

Query: 118 LINGRRIAPSATFGGDATNLNLIPMDAIERIEILRDGASAIYGSDAIGGVINIILKKTFD 177
           L++GRRI PS        +LNL+P   I  +E +  GAS+ YGSDA+GGV+N +L + F+
Sbjct: 128 LLDGRRIVPSNA--SSVVDLNLLPTPLIASVETITGGASSTYGSDAVGGVLNFLLDRRFE 185

Query: 178 GLAFDAKFGNPTQGGRDEKSASVTFGNTSDKSSSLVIIEHKQFDPLEGGQRPHLTANWDE 237
           G   DA++G   QG  + ++ S+T G                 D  EG  R  L+A++  
Sbjct: 186 GFKLDAQYGASDQGDAEAEAVSLTLGG----------------DFAEGRGRAVLSASYSN 229

Query: 238 KYGRSALYAPEGTYRPVASRPIKGADGT--FSDPVYTGLQVPGKDCPADRIVTSKAGSAC 295
           +   S L A        +   I G  GT      V+    +P        +  +  G   
Sbjct: 230 R--ASVLNASR------SFSLIGGFAGTSPLGSTVFDASNLPTAAAVNAAVSGAARGDTF 281

Query: 296 GFNHF---------------DGTDY------------------------LPDQTKDSVFS 316
           GFN+                 G DY                        +  QT+ +V++
Sbjct: 282 GFNNNGTLFTYQGARDYVSPGGIDYEGFRKPGPLQQTDFTYSTVDRNYLIIPQTRYNVYA 341

Query: 317 NMTYRITDELEWFGQAIVMR---DKSITSSTALW-TPNLYIAADNPLNPT--FGTAN--- 367
             +Y +T+ +E++   +  +      + S+     T    I + NP  PT   G  N   
Sbjct: 342 AASYELTEAVEFYTDVLFSQYQAGNQLASNPGTGPTTGFRIPSTNPFIPTELRGVLNSRP 401

Query: 368 --ASEVQAYHRLKGVADRTTEFDSNVVDVVTGLNLELDAGSLSW----YVQYSDQIVNIE 421
             A   +   R   +  R    + +V  + TGL  +L  G   W    Y+ Y     +  
Sbjct: 402 NPAGSFRLDKRFNELGPRRQNENYSVYQITTGLRGDL-VGLRDWTYDAYLTYGRVDNDTN 460

Query: 422 TDSYVFEDKLQ---EAVDKGL------YNPFVEGGNATQATLDTFLHTATRKATSNTTGT 472
              Y+    +Q   EA D G       +NPF  G N   A+   ++    R  T+N    
Sbjct: 461 YTGYLSRSAIQRLLEASDGGASLCTGGFNPF--GANPLSASCIAYVSRVPRNKTTNDQRV 518

Query: 473 GLSWAALAPISLPGGDLGYAVGMEYQKIEYKDTRD-------------AQQAAGNVLGTY 519
             +       +LP G++  AVG  Y++  Y  + D               + AGN     
Sbjct: 519 VEANLQGGLFTLPAGEVRAAVGAAYREQNYDFSPDNLLISTFTLNGVTGPELAGNSGTPL 578

Query: 520 GGDSAGDRSYKAAFVEL--ELPVLDHLNVKLASRYDQYSLPDVGQL-SNSVNVRYEALDN 576
            G       Y    + L  +LP +  L   L  R   Y    +GQ+ S   ++ +EA+D 
Sbjct: 579 SGSDTVSELYAEVLIPLLADLPFIRQLETNLGYRVSDYD--TIGQVASYKADLSWEAIDG 636

Query: 577 LVLRASYGQGFRAPSLDDLL-----------------------GEP-----------ATS 602
           L LR    +  RAPS+ +L                        G+P           A +
Sbjct: 637 LRLRGGVQRAVRAPSIGELFAAQNLSFPSIGVPVSSTGVRQFSGDPCDIRGAYRAPGAAN 696

Query: 603 YDYVTDTTLCQSLPADQQKGNPACEDTQYLRKSSGNKELEPEKSAQYSFGAV-------- 654
              V    L Q++PA Q   +    ++Q    + GN +L+ E +  ++ GA+        
Sbjct: 697 AGQVRSLCLAQNVPA-QVIDSYTFSNSQVSGVTGGNPDLQEETADSFTVGAILQSPLSSA 755

Query: 655 WNITENIDFVVDYYNIEITDQVSYIDA----QTIVDLEAIGGLGAYDPNYIYVKRKA--- 707
           W     +   +DYY+I I   V  +      +   + + +     YDPN ++ +  +   
Sbjct: 756 W--LSGVSGSIDYYDITIEQVVGTVSTTEQLRRCYNQDGVSN-PTYDPNNVFCRLFSRDP 812

Query: 708 -DGTIDEIGAGNINMDGVQTSGLDVSFTSNFDLADL-----GTFKFAVEGTYALEYTEQA 761
             G I      N N+  ++T G+D       DL D+     G     V GT  LE+  Q 
Sbjct: 813 NSGQITSTFETNANLGTLKTKGIDFQIDWRLDLTDIGAPDWGALALNVTGTRLLEWERQD 872

Query: 762 SPIAKRYDVLGTKG------YPPLRFNTTFSYAIDDFSTSLIAKYIDSYDGETPQQQEVG 815
            P     D  GT         P  +  +T ++  D ++  L  +    Y GE    +   
Sbjct: 873 IPGGPYTDRKGTVSNSFGLTLPEWKALSTLNWTQDPWTLGLRWR----YQGEV---ENFN 925

Query: 816 TNKQDFSSFTTWDLTFNYDFNSYGNVTVGARNLFDAMPAVNYSLGYPGYDTDTHNILGRV 875
              Q   +   +DL   ++ NS  ++  G  NL D  P V         D  T++++GR 
Sbjct: 926 NRSQVIDAIHYFDLNAGFEINSTVSLRAGVNNLTDEQPPVYAPAIAANTDPSTYDLVGRR 985

Query: 876 VFAGYKVKF 884
            + G   +F
Sbjct: 986 YYVGLTARF 994