Pairwise Alignments

Query, 533 a.a., Na+/H+ antiporter (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 500 a.a., Na(+)/H(+) antiporter NhaB from Pseudomonas putida KT2440

 Score =  582 bits (1500), Expect = e-170
 Identities = 291/500 (58%), Positives = 376/500 (75%), Gaps = 4/500 (0%)

Query: 1   MPMTMSQAFIGNFLGNSPKWYKIAILSFLIINPILFFYVSPFVAGWVLVLEFIFTLAMAL 60
           M   ++ A    FLG SP WYK+ I  FL++NP+L   + P   GW LVLEFIFTLAMAL
Sbjct: 1   MSRPLTGALAHGFLGKSPIWYKVVICLFLVLNPLLLVTIGPVATGWALVLEFIFTLAMAL 60

Query: 61  KCYPLQPGGLLAIEAVAIGMTSASQVLHEIEANLEVLLLLVFMVAGIYFMKQLLLFAFTK 120
           KCYPL PGGLL IEA+ + MT+   +  E++ N  V+LLL+FMVAGI+FMK+LLLF F++
Sbjct: 61  KCYPLMPGGLLLIEALLLQMTTPQALYEELQHNFPVILLLMFMVAGIHFMKELLLFLFSR 120

Query: 121 MITKVRSKILVSLLFCLASAFLSAFLDALTVIAVIITVAVGFYSIYHKVASGKDFSADHD 180
           ++  VRSK +++LLFC+ SAFLSAFLDALTV AVII+ AVGFY++YH+VASG +   D  
Sbjct: 121 ILLGVRSKAILALLFCVLSAFLSAFLDALTVTAVIISAAVGFYAVYHRVASGANPRED-- 178

Query: 181 HTSENKNEEGEDQLNEAELESFRGFLRNLLMHAGVGTALGGVCTMVGEPQNLIIAAQANW 240
             S  ++++    L+  +L+ FR FLR+LLMH  VGTALGGVCT+VGEPQNL+I  +  W
Sbjct: 179 --SALESDQQVAHLHREDLDQFRAFLRSLLMHGAVGTALGGVCTLVGEPQNLLIGHEMGW 236

Query: 241 QFGEFAIRMSPVTVPVFIAGILTCYIVEKFRIFGYGAQLPDAVHKILCDYDAHEDARRTN 300
            F +F ++++PV++PV  AG++TC ++EK R+FGYG  +P+ V ++L  Y A +DA RT 
Sbjct: 237 HFVDFFLKVAPVSLPVLGAGLVTCVLLEKVRLFGYGTLMPEPVRRVLTAYAAEDDAARTQ 296

Query: 301 KDKMKLIVQAFIGVWLIAGLALHLASVGLIGLSVIILATAFNGITDEHALGKAFEEALPF 360
             ++ L VQ    + LI  L LH+A VGLIGL VI+L TAF GITDEH LG+AF++A+PF
Sbjct: 297 AQRIALWVQGLAALILIICLGLHVAEVGLIGLMVIVLITAFTGITDEHRLGRAFQDAMPF 356

Query: 361 TALLAVFFSVVAVIIDQQLFAPVIQWALNHEGNTQLVIFYIANGLLSMVSDNVFVGTVYI 420
           T+LL VFF+VVAVI  QQLF+P+I W L      Q  + Y+ANGLLS +SDNVFV T+YI
Sbjct: 357 TSLLVVFFAVVAVIHQQQLFSPLINWVLALPAEQQPGMLYLANGLLSAISDNVFVATIYI 416

Query: 421 NEVKAALLNGQITRDQFDLLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYGR 480
            EVK A L+G ++R+ F+ LAVAINTGTNLPSVATPNGQAAFLFLLTSA+APLIRLSYGR
Sbjct: 417 TEVKQAFLDGSMSREHFETLAVAINTGTNLPSVATPNGQAAFLFLLTSAIAPLIRLSYGR 476

Query: 481 MVWMALPYTIVLSIVGVMAI 500
           MVWMALPYT+V+  +G  A+
Sbjct: 477 MVWMALPYTVVMGGLGWWAV 496