Pairwise Alignments

Query, 533 a.a., Na+/H+ antiporter (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 514 a.a., Na+/H+ antiporter NhaB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  674 bits (1739), Expect = 0.0
 Identities = 344/513 (67%), Positives = 411/513 (80%), Gaps = 10/513 (1%)

Query: 1   MPMTMSQAFIGNFLGNSPKWYKIAILSFLIINPILFFYVSPFVAGWVLVLEFIFTLAMAL 60
           M ++  +A   NFLG SP WYK+A+L FLI+NP +F   +PF+AGW+LV EFIFTLAMAL
Sbjct: 1   MEISWGRAMWRNFLGQSPDWYKLALLVFLIVNPFIFL-ANPFIAGWLLVAEFIFTLAMAL 59

Query: 61  KCYPLQPGGLLAIEAVAIGMTSASQVLHEIEANLEVLLLLVFMVAGIYFMKQLLLFAFTK 120
           KCYPL PGGLLAIEAV IGMTSA+ V  E+ ANLEVLLLL+FMVAGIYFMKQLLLF FT+
Sbjct: 60  KCYPLLPGGLLAIEAVIIGMTSAAHVREEVAANLEVLLLLMFMVAGIYFMKQLLLFIFTR 119

Query: 121 MITKVRSKILVSLLFCLASAFLSAFLDALTVIAVIITVAVGFYSIYHKVASGKDFSADHD 180
           ++  +RSK+++SL FC+A+AFLSAFLDALTV+AV+I+VAVGFY IYH+VAS +       
Sbjct: 120 LLLSIRSKMVLSLAFCVAAAFLSAFLDALTVVAVVISVAVGFYGIYHRVASSRG------ 173

Query: 181 HTSENKNEEGEDQLNEAELESFRGFLRNLLMHAGVGTALGGVCTMVGEPQNLIIAAQANW 240
             ++  ++   D   +  LE FRGFLR+L+MHAGVGTALGGV TMVGEPQNLIIA  A W
Sbjct: 174 EENDMLDDSHIDPHYKTVLEQFRGFLRSLMMHAGVGTALGGVMTMVGEPQNLIIAKAAGW 233

Query: 241 QFGEFAIRMSPVTVPVFIAGILTCYIVEKFRIFGYGAQLPDAVHKILCDYDAHEDARRTN 300
            FG+F +RMSPVTVPV + G+LTC +VEK R FGYG  LP+ V  +L  +D     +RT 
Sbjct: 234 HFGDFFLRMSPVTVPVLVCGLLTCMLVEKMRWFGYGETLPEKVRDVLQQFDDQSRKKRTR 293

Query: 301 KDKMKLIVQAFIGVWLIAGLALHLASVGLIGLSVIILATAFNGITDEHALGKAFEEALPF 360
           +DK+KLIVQA IGVWL+  LALHLA VGLIGLSVIILATA  G+TDEHA+GKAF E+LPF
Sbjct: 294 QDKIKLIVQAIIGVWLVTALALHLAEVGLIGLSVIILATALTGVTDEHAIGKAFTESLPF 353

Query: 361 TALLAVFFSVVAVIIDQQLFAPVIQWALNHEGNTQLVIFYIANGLLSMVSDNVFVGTVYI 420
           TALL VFFS+VAVIIDQ LFAP+IQ+ L    + QL +FY+ NGLLS +SDNVFVGT+YI
Sbjct: 354 TALLTVFFSIVAVIIDQHLFAPIIQFVLQASEHAQLTLFYLFNGLLSSISDNVFVGTIYI 413

Query: 421 NEVKAALLNGQITRDQFDLLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYGR 480
           NE KAA+ NG I+  QF+LLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYGR
Sbjct: 414 NEAKAAMENGAISLKQFELLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYGR 473

Query: 481 MVWMALPYTIVLSIVGVMAIQIGF---LEQMTQ 510
           MVWMALPYTIVL+++G++ ++       E MTQ
Sbjct: 474 MVWMALPYTIVLTLIGLLCVEFTLAPATEWMTQ 506