Pairwise Alignments

Query, 412 a.a., uracil permease (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 421 a.a., putative uracil permease from Pseudomonas putida KT2440

 Score =  543 bits (1399), Expect = e-159
 Identities = 263/409 (64%), Positives = 335/409 (81%), Gaps = 8/409 (1%)

Query: 8   LQGAQMLFVAFGALVLMPLLTGLDTSVALFTAGIGTLLFQLITKRQVPIFLASSFAFIAP 67
           + GAQMLFVAFGALVLMPL+TGLD +VALFTAGIGTLLFQL+T RQVP+FLASSFAFI P
Sbjct: 14  VSGAQMLFVAFGALVLMPLITGLDPNVALFTAGIGTLLFQLVTGRQVPVFLASSFAFITP 73

Query: 68  ILYGVQTWGIPSTMGGIMAAGVVYVCLGALVKVRGTDFIHKLLPPVVVGPVIIIIGLGLA 127
           I+     +G+  TMGG+MAAG VY  +G +VK++GT FI ++LPPVV+GPVII IGL +A
Sbjct: 74  IILAKGQFGLAETMGGVMAAGFVYTFMGLMVKIKGTGFIDRMLPPVVIGPVIISIGLAMA 133

Query: 128 PVAVNMALGKSGDGSLALVPTNTALIISLVSLCTTIAVAIFAKGLLKVMPILAGIIVGYG 187
           P+A NMA+GK GDG+ AL+P  TA++IS+ +L TT+ VA+F KG+ +++PI++G++VG+ 
Sbjct: 134 PIAANMAMGKGGDGT-ALMPYKTAMLISMPALLTTLIVAVFGKGIFRLVPIISGVLVGFA 192

Query: 188 LSLAFGIVDFSVVTAANWIAIPKFVAPEFNWHAIAFMIPVAIAPAVEHIGDILAISNVTG 247
           LS AFG+VD + + AA W+ IP F AP FNW AI F++PVA+APA+EHIG ++A+ +VTG
Sbjct: 193 LSFAFGVVDTARIAAAPWLEIPNFTAPAFNWQAILFIVPVALAPAIEHIGGVIAVGSVTG 252

Query: 248 KDFMKKPGLHRTLTGDGVATIAAAAFGGPPNTTYSEVTGAVTLTRNFDPRIMTWTAITAI 307
           +D++KKPGLHRTL GDG+AT AA  FGGPPNTTY+EVTGAV LT+N++P+IMTW A+ AI
Sbjct: 253 RDYLKKPGLHRTLLGDGLATTAAGLFGGPPNTTYAEVTGAVMLTKNYNPKIMTWAAVFAI 312

Query: 308 TLAFVGKLGALMQTIPVPVMGGIMCLLFGSIAAVGLNTLIRNHVDLSEPRNLSIVGVTLV 367
           TLAF+GK GAL+Q+IPVPVMGGI+CLLFGSIAAVG+NT+IR+ +DL E RNL IV VTLV
Sbjct: 313 TLAFIGKFGALLQSIPVPVMGGILCLLFGSIAAVGMNTMIRHKIDLGEARNLVIVSVTLV 372

Query: 368 FGIGGMAFGIG----SFSLTGISLCGIVAITMNLLLPAS---KHHKQDV 409
           FGIGG+  G G     + L GI+LC IVAI +NL+LP +   KH K DV
Sbjct: 373 FGIGGVLIGSGDGPDDWGLKGIALCAIVAIALNLILPGNDSWKHKKLDV 421