Pairwise Alignments

Query, 412 a.a., uracil permease (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 429 a.a., Uracil permease from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  297 bits (761), Expect = 4e-85
 Identities = 155/393 (39%), Positives = 236/393 (60%), Gaps = 5/393 (1%)

Query: 6   IPLQGAQMLFVAFGALVLMPLLTGLDTSVALFTAGIGTLLFQLITKRQVPIFLASSFAFI 65
           IPL   Q LF  FGA VL+P+L  ++ +  L   GIGTLL+  I K ++P +L SSFAFI
Sbjct: 18  IPLS-LQHLFAMFGATVLVPVLFHINPATVLLFNGIGTLLYLFICKGKIPAYLGSSFAFI 76

Query: 66  APILYGVQTWGIPSTMGGIMAAGVVYVCLGALVKVRGTDFIHKLLPPVVVGPVIIIIGLG 125
           +P+L  +   G    +GG +  GV++  +  +VK  GT ++  + PP  +G ++ +IGL 
Sbjct: 77  SPVLL-LLPLGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVMFPPAAMGAIVAVIGLE 135

Query: 126 LAPVAVNMALGKSGDGSLALVPTNTALIISLVSLCTTIAVAIFAKGLLKVMPILAGIIVG 185
           LA VA  MA      G     P    +IIS+V+L  T+  ++  +G L ++PIL G++ G
Sbjct: 136 LAGVAAGMAGLLPAQGQS---PDTKTIIISMVTLAVTVFGSVLFRGFLAIIPILIGVLAG 192

Query: 186 YGLSLAFGIVDFSVVTAANWIAIPKFVAPEFNWHAIAFMIPVAIAPAVEHIGDILAISNV 245
           Y LS A G+VD + +  A+W A+P F  P F W AI  ++P A+    EH+G ++  +N+
Sbjct: 193 YALSFALGVVDTTPIAQAHWFALPTFYTPRFEWFAILTILPAALVVIAEHVGHLVVTANI 252

Query: 246 TGKDFMKKPGLHRTLTGDGVATIAAAAFGGPPNTTYSEVTGAVTLTRNFDPRIMTWTAIT 305
             KD ++ PGLHR++  +G++TI +  FG  PNTTY E  G + +TR +   ++   AI 
Sbjct: 253 VKKDLVRDPGLHRSMFANGLSTIISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIF 312

Query: 306 AITLAFVGKLGALMQTIPVPVMGGIMCLLFGSIAAVGLNTLIRNHVDLSEPRNLSIVGVT 365
           AI L+ VGKL A +Q IP+PVMGG+  LL+G I A G+  LI + VD ++ +NL +  V 
Sbjct: 313 AILLSCVGKLAAAIQIIPLPVMGGVSLLLYGVIGASGIRVLIESKVDYNKAQNLILTSVI 372

Query: 366 LVFGIGGMAFGIGSFSLTGISLCGIVAITMNLL 398
           L+ G+ G    IG+  L G++L  IV I ++L+
Sbjct: 373 LIIGVSGAKVHIGAAELKGMALATIVGICLSLI 405