Pairwise Alignments

Query, 412 a.a., uracil permease (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 440 a.a., uracil transport protein from Agrobacterium fabrum C58

 Score =  271 bits (693), Expect = 3e-77
 Identities = 163/405 (40%), Positives = 233/405 (57%), Gaps = 22/405 (5%)

Query: 10  GAQMLFVAFGALVLMPLLTGLDTSVALFTAGIGTLLFQLITKRQVPIFLASSFAFIAPIL 69
           G Q +   FG+ VL PL+ G D +V++  +GI TL+F +    +VP +L SSFAFI P+L
Sbjct: 34  GLQHVVAMFGSTVLAPLIMGFDPNVSILFSGISTLIFFIAVGGRVPSYLGSSFAFIGPVL 93

Query: 70  Y------GVQTWGIPSTMGGIMAAGVVYVCLGALVKVRGTDFIHKLLPPVVVGPVIIIIG 123
                  G  +  I   +GGI+AAGV+Y  +G +V + G ++I KL+PPV+ G ++  IG
Sbjct: 94  VATGAAAGAASPDIALALGGIIAAGVLYALIGVIVMIVGHNWIEKLMPPVLTGAIVAAIG 153

Query: 124 LGLAPVAVNMALGKSGDGSLALVPTNTALI--ISLVSLCTTIAVAIFAKGLLKVMPILAG 181
           L LAP+A+  A G +G G+    P    L   I+++++ +  A+A++A G+ + +PIL G
Sbjct: 154 LVLAPIAIASASG-TGPGN----PDGDQLSRWIAILTVTSVGAIAVYAPGMTRRLPILLG 208

Query: 182 IIVGY----GLSLAFGI---VDFSVVTAANWIAIPKFVAPEFNWHAIAFMIPVAIAPAVE 234
             + Y     L+  FG+   VDF+ V AA W  +P F  P F+  AIA + PV +    E
Sbjct: 209 GAIAYLAYLVLANGFGLGKPVDFAGVAAAAWFGLPAFTTPVFSAPAIALIAPVVVILVAE 268

Query: 235 HIGDILAISNVTGKDFMKKPGLHRTLTGDGVATIAAAAFGGPPNTTYSEVTGAVTLTRNF 294
           ++G I AI  +TG++    P L R   GDG+ATI + AFGG   TTY+E  G + +TR F
Sbjct: 269 NLGHIKAIGAMTGRNL--DPYLGRAFIGDGIATIFSGAFGGTGMTTYAENMGVMAITRIF 326

Query: 295 DPRIMTWTAITAITLAFVGKLGALMQTIPVPVMGGIMCLLFGSIAAVGLNTLIRNHVDLS 354
              +    A+ AI L F  K GAL+QTIP PV+GG+  ++FG IAA      + N VD S
Sbjct: 327 STLVFIVAALVAIILGFSPKFGALIQTIPGPVIGGLSVVVFGLIAATAGRIWVENKVDFS 386

Query: 355 EPRNLSIVGVTLVFGIGGMAFGIGSFSLTGISLCGIVAITMNLLL 399
           EPRNL  VG+ LV G G     +  F+L GI    I AI    LL
Sbjct: 387 EPRNLITVGIALVLGAGNFKLNVAGFTLDGIGTATIGAIAFYHLL 431