Pairwise Alignments

Query, 236 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 486 a.a., Chromosomal replication initiator protein DnaA from Xanthobacter sp. DMC5

 Score = 51.6 bits (122), Expect = 3e-11
 Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 25/216 (11%)

Query: 20  TFNSYYPAAGNDELIQKLRANAEGHGEAA-----IYVWGPVKSGRTHLMHAACAHANELD 74
           TF S+     N       R  AE    AA     +Y+   V  G+THL+ A         
Sbjct: 149 TFESFVVGKSNSLAFAAARKVAETPAGAAPVYNPLYLHAAVGLGKTHLLQAVARAGAAHG 208

Query: 75  RRSFYL-----------PLGIHASISTALLEGLEQLDLICIDDVDDIAGHPVWEEAIFDL 123
           RR+ YL            L  H++I  A  + L  +D + IDD+  + G+ + +E    L
Sbjct: 209 RRTTYLTAERFMYGFVSALKSHSAI--AFKDTLRTIDTLVIDDLQFLKGNNLQQEFCHTL 266

Query: 124 YNRVAENKRCALVVSGRSAPADAGFLLPDLVSRMQWGLNYQLQPMADDEKLAALQRR--- 180
            N + +  R  +V++    P +   L   + SR+  GL  +L P+ +D +L  L+ R   
Sbjct: 267 -NALLDGGR-QVVLAADCLPGELEHLDERVRSRLAGGLVVELAPLEEDLRLEILKARYQT 324

Query: 181 --AAMRGLQLPEDVGRFLLNRMARDLRTLFDVLDKL 214
                +G  +P  V  FL   + +  R L   L+KL
Sbjct: 325 LAEQHQGFAVPAPVLEFLARSVGQSGRDLDGALNKL 360