Pairwise Alignments

Query, 236 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 506 a.a., chromosomal replication initiator protein from Pseudomonas putida KT2440

 Score = 66.6 bits (161), Expect = 9e-16
 Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 12/202 (5%)

Query: 44  HGEAAIYVWGPVKSGRTHLMHAACAHANELDRRSFYLPLGIHASISTAL----LEGLEQ- 98
           HG   ++++G V  G+THLMHA   H  + +  +  + L     ++  +    L  + + 
Sbjct: 202 HGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHSERFVADMVKALQLNAINEF 261

Query: 99  ------LDLICIDDVDDIAGHPVWEEAIFDLYNRVAENKRCALVVSGRSAPADAGFLLPD 152
                 +D + IDD+   A     +E  F  +N + E  +  ++ S R  P +   L   
Sbjct: 262 KRFYRSVDALLIDDIQFFARKERSQEEFFHTFNALLEGGQQVILTSDRY-PKEIEGLEER 320

Query: 153 LVSRMQWGLNYQLQPMADDEKLAALQRRAAMRGLQLPEDVGRFLLNRMARDLRTLFDVLD 212
           L SR  WGL   ++P   + ++A L ++A    ++LP D   F+  R+  ++R L   L 
Sbjct: 321 LKSRFGWGLTVAVEPPELETRVAILMKKADQAKVELPHDAAFFIAQRIRSNVRELEGALK 380

Query: 213 KLDKASLVHQRKLTIPFAKEML 234
           ++   S    R +TI   +E L
Sbjct: 381 RVIAHSHFMGRDITIELIRESL 402