Pairwise Alignments

Query, 236 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 233 a.a., DnaA inactivator Hda from Serratia liquefaciens MT49

 Score =  235 bits (599), Expect = 6e-67
 Identities = 118/234 (50%), Positives = 156/234 (66%), Gaps = 1/234 (0%)

Query: 3   LNSPLQLSLPVYLPDDETFNSYYPAAGNDELIQKLRANAEGHGEAAIYVWGPVKSGRTHL 62
           +N+P QLSLP+YLPDDETF S+YP   N  L+  +++       + IY W     GR+HL
Sbjct: 1   MNTPAQLSLPLYLPDDETFASFYPGE-NPSLLSAIQSAVRQEHGSYIYFWSREGGGRSHL 59

Query: 63  MHAACAHANELDRRSFYLPLGIHASISTALLEGLEQLDLICIDDVDDIAGHPVWEEAIFD 122
           +HAACA  ++      Y+PL   A     +L+G+EQL L+CID+++ IAG   WE AIF+
Sbjct: 60  LHAACAELSQRGEAVGYVPLDKRAYFVPEVLDGMEQLALVCIDNIECIAGDEEWEMAIFN 119

Query: 123 LYNRVAENKRCALVVSGRSAPADAGFLLPDLVSRMQWGLNYQLQPMADDEKLAALQRRAA 182
           LYNR+ E  R  L ++G   P      LPDL SR+ WG  Y+LQP++D+EKL ALQ R  
Sbjct: 120 LYNRILETGRTRLFITGDRPPRQLNLNLPDLASRLDWGQIYKLQPLSDEEKLLALQLRGK 179

Query: 183 MRGLQLPEDVGRFLLNRMARDLRTLFDVLDKLDKASLVHQRKLTIPFAKEMLHL 236
           +RG +LPEDVGRFLL R+ R++RTLF  LD+LD AS+  QRKLTIPF KE+L L
Sbjct: 180 LRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDHASITAQRKLTIPFVKEILGL 233