Pairwise Alignments

Query, 236 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 229 a.a., regulatory inactivation of DnaA Hda protein from Kangiella aquimarina DSM 16071

 Score =  153 bits (387), Expect = 2e-42
 Identities = 94/231 (40%), Positives = 139/231 (60%), Gaps = 6/231 (2%)

Query: 8   QLSLPVYLPDDETFNSYYPAAGNDELIQKLRANAEGHGEAAIYVWGPVKSGRTHLMHAAC 67
           QL L + L  D TF ++     N  L+QKL +  +G  +  IY++     GR+HL+ A  
Sbjct: 3   QLPLDIELHSDATFANFVEGE-NQLLLQKLDSICQGDNDF-IYIYSEKGHGRSHLLQALT 60

Query: 68  AHANEL--DRRSFYLPLGIHASISTALLEGLEQLDLICIDDVDDIAGHPVWEEAIFDLYN 125
              +E   D+   YLPL  +  +   +L+GL   D + +D VD++ G   W+ AIF+LYN
Sbjct: 61  HAFSEQNPDKLIAYLPLD-NRMLHPQMLDGLVAFDCVSLDGVDEVIGQLEWQTAIFNLYN 119

Query: 126 RVAENKRCALVVSGRSAPADAGFLLPDLVSRMQWGLNYQLQPMADDEKLAALQRRAAMRG 185
           ++ E  + +L+V+G  AP+  G  L DL SR+     Y ++P+ D+EK   LQ++A  RG
Sbjct: 120 QLKEQGK-SLLVTGLVAPSQLGIELQDLKSRLSAMFIYNIKPLNDEEKRILLQKKAQERG 178

Query: 186 LQLPEDVGRFLLNRMARDLRTLFDVLDKLDKASLVHQRKLTIPFAKEMLHL 236
           L+L  DV ++LL R  RDL TL ++LDKLD+ASL  +RKLTIPF KE+L L
Sbjct: 179 LELGTDVAQYLLARQQRDLPTLLEILDKLDQASLQAKRKLTIPFIKEVLDL 229