Pairwise Alignments

Query, 236 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 464 a.a., chromosomal replication initiator protein DnaA from Kangiella aquimarina DSM 16071

 Score = 68.2 bits (165), Expect = 3e-16
 Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 14/227 (6%)

Query: 21  FNSYYPAAGNDELIQKLRANAEGHGEA--AIYVWGPVKSGRTHLMHA---ACAHANELDR 75
           F+++     N       +   E  GEA   ++++G V  G+THLMH+   A    N   R
Sbjct: 135 FSNFVEGKSNQLARAAAQQVTENPGEAYNPLFIYGGVGLGKTHLMHSVGNAILEQNPNAR 194

Query: 76  RSFYLPLGIHASISTALLEGL--------EQLDLICIDDVDDIAGHPVWEEAIFDLYNRV 127
             +       A++  AL  G           +D + IDD+   A     +E  F  +N +
Sbjct: 195 VVYLHSERFMANMVKALQTGTMDKFKNFYRSVDALLIDDIQFFANKGRTQEEFFHTFNNL 254

Query: 128 AENKRCALVVSGRSAPADAGFLLPDLVSRMQWGLNYQLQPMADDEKLAALQRRAAMRGLQ 187
            E  +  ++   R  P +   L   L SR  WGL   ++P   + ++A L  +A    ++
Sbjct: 255 IEKNKQVIITCDRF-PKEVEGLEERLKSRFGWGLTVAVEPPELETRVAILMSKAHSSKIE 313

Query: 188 LPEDVGRFLLNRMARDLRTLFDVLDKLDKASLVHQRKLTIPFAKEML 234
           LP +V  F+  R+  ++R L   L ++   +    R +T+ F K+ L
Sbjct: 314 LPNEVAFFIAKRIRSNVRELEGALKRVIANAQFTGRAITLDFVKDAL 360