Pairwise Alignments

Query, 489 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 487 a.a., Putative Zn-dependent protease, contains TPR repeats from Enterobacter asburiae PDN3

 Score =  377 bits (969), Expect = e-109
 Identities = 210/471 (44%), Positives = 300/471 (63%), Gaps = 4/471 (0%)

Query: 11  KPLAASVLALMLLGGAAKSFANND--LPDLGTAAVNTFSLEKEMIYGDAYMRVIRSSAPM 68
           K L A+++A + +G    +FA++   LPD+GT A +T S+ +EM  GD Y+R +R SAP+
Sbjct: 7   KTLVATLIAAVTVGQVLPAFADSSDSLPDMGTTAGSTLSIGQEMQMGDYYVRQLRGSAPL 66

Query: 69  LNDPVLSQYLTELGNKLVAHATGVKTPFYFFLLQNDEINAFAFFGGHVAVHTGLFLNADN 128
           +NDP+L QY+  LG +LV+HA  VKTPF+F+L+ NDEINAFAFFGG+V +H+ LF  +DN
Sbjct: 67  INDPLLVQYINGLGMRLVSHADSVKTPFHFYLINNDEINAFAFFGGNVVLHSALFRYSDN 126

Query: 129 ESELASVLGHEITHVTQRHLARSLEAQQKTGPATVAGLLGAILLTIAVPQAGMAALATTQ 188
           ES+LASV+ HEI+HVTQRHLAR++E Q++  P T  G LG+ILL +A PQAGMAAL  T 
Sbjct: 127 ESQLASVMAHEISHVTQRHLARAMEDQKRNAPLTWVGALGSILLAMASPQAGMAALTGTL 186

Query: 189 AMATQSKINYTRLHEKEADRIGMQILVDAGFDPNASAEFFGKLASRYRFTTTPPQMLLTH 248
           A   Q  I++T+ +E+EADRIG+Q+L  +GFDP A   F  KL  + R+++ PP++LLTH
Sbjct: 187 AGTRQGMISFTQQNEQEADRIGIQVLQRSGFDPQAMPSFLEKLLDQARYSSRPPEILLTH 246

Query: 249 PLPESRISEARDRAQQYPHRYVPDNLNFQLAKARIQVRFSSFSDDAVLSMFEKQLNKQTY 308
           PLPESR+S+AR+RA Q     V  + +F +AK R    ++S  +     + +  L K   
Sbjct: 247 PLPESRLSDARNRANQMRPVVVQSSQDFYMAKVRTLGMYNSGRNQLTSDLLD-SLAKGNV 305

Query: 309 GFKEAALYGKALALFRLKKFDESEKIVDELLKIDDNNLFYIDTKTDLLNERKDYAQAIKL 368
             K AA YG+AL      K+DE+ K +  LL  D NN +Y+D  TD+   +K  A AI  
Sbjct: 306 REKNAAQYGQALQAMEASKYDEARKALQPLLAADPNNPWYLDLSTDIDLGQKKTADAINR 365

Query: 369 LEAQRNLKPTSQVINANLANIYIEAGEPAKAIPLLEDMIFLDKQNQLPYQLLNLAYKKLG 428
           L+  ++++ T+ V+  NLAN Y++ G+P +A  +L    F +K +Q  + LL  A  +LG
Sbjct: 366 LKGAKDVR-TNPVLQLNLANAYLQGGQPGEAATILNRYTFNNKDDQNGWDLLAQAEAQLG 424

Query: 429 NPGMEYFSNAELMALGANYKGAIDQLNFAYRASEGNQLQLARIEARIRQFK 479
           N   E  + AE  AL      AI  L+ A    +   LQ AR +ARI Q +
Sbjct: 425 NRDQELAARAEGFALVGRLDQAISTLSSASSQVKLGSLQQARYDARIDQLR 475