Pairwise Alignments

Query, 620 a.a., CBS domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 485 a.a., 'Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain' transl_table=11 from Sphingobium sp. HT1-2

 Score = 49.3 bits (116), Expect = 4e-10
 Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 9/130 (6%)

Query: 142 KAKDLATTSRISTLMSSSPITIDAHATVTQAALLMRNSRVSSLLVTD-NHKLVGILTDKD 200
           +A  +    R  + M  +PITI   AT+  A +LM+  R+S + V + N KLVGILT +D
Sbjct: 77  QADAVRAVKRFESGMVVNPITILPTATLADAQMLMQRHRISGIPVVEANGKLVGILTHRD 136

Query: 201 LRNRVLASGLDGQIAVHQAMTTSPISISSNALIFEAMLLMSEHNIHHLPIIDEQNTDEVK 260
            R          ++     + T    +  +    EAM L+    I  L ++D    D   
Sbjct: 137 TRFAENPGQPVSELMTKDNLATVKAGVGQD----EAMRLLHARRIEKLLVVD----DNYH 188

Query: 261 AIGMVTSTDI 270
            +G++T  DI
Sbjct: 189 CVGLITVKDI 198



 Score = 35.0 bits (79), Expect = 7e-06
 Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 20/113 (17%)

Query: 160 PITIDAHATVTQAALLMRNSRVSSLLVTDNHKLVGILTDKDLRNRVLASGLDGQIAVHQ- 218
           PI   A  TVT+A + +  +++           +G+L     RN  +    D   AV + 
Sbjct: 41  PILSSAMDTVTEADMAIVMAQLGG---------IGVLH----RNLTVEEQADAVRAVKRF 87

Query: 219 --AMTTSPISISSNALIFEAMLLMSEHNIHHLPIIDEQNTDEVKAIGMVTSTD 269
              M  +PI+I   A + +A +LM  H I  +P+++       K +G++T  D
Sbjct: 88  ESGMVVNPITILPTATLADAQMLMQRHRISGIPVVEANG----KLVGILTHRD 136



 Score = 31.2 bits (69), Expect = 1e-04
 Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 6/91 (6%)

Query: 152 ISTLMSSSPI-TIDAHATVTQAALLMRNSRVSSLLVTD-NHKLVGILTDKDLRNRV---- 205
           +S LM+   + T+ A     +A  L+   R+  LLV D N+  VG++T KD+   V    
Sbjct: 147 VSELMTKDNLATVKAGVGQDEAMRLLHARRIEKLLVVDDNYHCVGLITVKDIEKAVTYPQ 206

Query: 206 LASGLDGQIAVHQAMTTSPISISSNALIFEA 236
                 G++ V  A T     +  +  + +A
Sbjct: 207 ATKDASGRLRVAAASTVGDKGLERSKALIDA 237