Pairwise Alignments

Query, 620 a.a., CBS domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 384 a.a., nitrite transporter, HPP family (from data) from Pseudomonas putida KT2440

 Score = 51.6 bits (122), Expect = 6e-11
 Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 16/127 (12%)

Query: 168 TVTQAALLMRNSRVSSLLVTDNHKLVGILTDKDL------RNRVLASGLDGQIAVH--QA 219
           T+ QA  ++ +  + +L V  + KLVGI++  DL      R R    GL G+ AV   Q 
Sbjct: 257 TLEQAWKMLASHHLKTLPVLQHGKLVGIVSLSDLVGPAMQRGRFSWRGLFGRQAVRMAQV 316

Query: 220 MTTSPISISSNALIFEAMLLMSEHNIHHLPIIDEQNTDEVKAIGMVTSTDILRGQGSQPL 279
           M+   +S+SS   +   + L+ E  +H LP++D       K +G++T TD++ G   Q  
Sbjct: 317 MSRRVVSVSSQHPLERLLPLLCEQGLHCLPVLDGD-----KLVGVITQTDLIAGLKRQ-- 369

Query: 280 LLIGEIE 286
            L+ +IE
Sbjct: 370 -LLSKIE 375



 Score = 27.7 bits (60), Expect = 0.001
 Identities = 14/51 (27%), Positives = 27/51 (52%)

Query: 151 RISTLMSSSPITIDAHATVTQAALLMRNSRVSSLLVTDNHKLVGILTDKDL 201
           R++ +MS   +++ +   + +   L+    +  L V D  KLVG++T  DL
Sbjct: 312 RMAQVMSRRVVSVSSQHPLERLLPLLCEQGLHCLPVLDGDKLVGVITQTDL 362