Pairwise Alignments

Query, 223 a.a., transcriptional regulator, GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 242 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  139 bits (349), Expect = 6e-38
 Identities = 77/201 (38%), Positives = 111/201 (55%), Gaps = 4/201 (1%)

Query: 10  KTRTQLVVEVLREKILSGEIAAGEPLRQTALAEALHVSRIPVREALLQLEAEGLVKFEPH 69
           +T T+ V   +RE IL G + AG PLRQ  LA A  VSR+PVREAL QLEA  LV+F PH
Sbjct: 34  RTATEFVEAAMREAILEGVLPAGAPLRQEDLAAAFGVSRMPVREALRQLEARALVEFHPH 93

Query: 70  KGATATELSVAQVTELFELRAMIETDLLAKAIPQLQAEDLIKAERVLEQLESAFKHEDAV 129
           +GA   E+S     ++  +RA +E   L  ++P L A+DL  A  ++ ++++    E   
Sbjct: 94  RGAVVAEISAEDSADIGAIRAALEPAALRLSLPHLTADDLALAAELIAEMDA----EADP 149

Query: 130 ASWSELNTQFHTCLYQAANRPHTLEVVHGLNTNCDRYIRLQLLLAGGIPAAEHEHRELLN 189
               ELN +FH  LY  A RP  L +V    +  DRY+R Q    G  P ++ EH  LL 
Sbjct: 150 GRMGELNRRFHMTLYSRAGRPRLLALVEQHLSAADRYLRFQFSALGYHPRSQDEHHALLA 209

Query: 190 YCKQRETEKATALLRHHILHA 210
            C+  + + A  ++  H++ A
Sbjct: 210 ACRAGDADAACGIVVRHVIQA 230