Pairwise Alignments

Query, 297 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 305 a.a., transcriptional regulator GcvA from Serratia liquefaciens MT49

 Score =  154 bits (390), Expect = 2e-42
 Identities = 101/291 (34%), Positives = 156/291 (53%), Gaps = 6/291 (2%)

Query: 1   MFTSLPPLNALRAFESAARLQSITLASKELHVTHGAISKQIRVLEDFLGFALFVRLHKKV 60
           M   LPPLNALR F++AAR  S T A++EL VT  A+S QI+ LEDFLG  LF R ++ +
Sbjct: 1   MSKRLPPLNALRVFDAAARHLSFTKAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSL 60

Query: 61  ELTDEAKRYFPHVQAALQTLSSATADLRSQGSRPQTLAINVLPSLTINWLIPRMEQFKSR 120
            LT+E + Y+  ++    +++ AT  L+++ ++   L +++ PS  I WL+PR+  F S 
Sbjct: 61  LLTEEGQSYYLDIKEIFSSINEATRKLQARSAK-GALTVSLPPSFAIQWLVPRLSGFNSA 119

Query: 121 YPHLYVDLSIGDFAVDFSQGRYDIAIRSSTKLPKGVNYIKLMDEDLCLVCAPSLAP---K 177
           YP + V +   D   D      D+AI        G+   +L  E L  VC+PSL      
Sbjct: 120 YPGIDVRIQAVDREEDKLADDVDVAIFYGRGNWTGLRAERLYAEYLLPVCSPSLLTGEHA 179

Query: 178 LQCIEDINHVTLLKHTTRPELWDYWAEKVGLV-LTQEQTFGVEHFYMLSQAAASGMGAAL 236
           L+   D+ + TLL  T+R + W  +  ++GL  +  +Q     H  M+ QAA  G G AL
Sbjct: 180 LKMTSDLAYHTLLHDTSRRD-WLAYTRQLGLQHINVQQGPIFSHSAMVVQAAVHGQGIAL 238

Query: 237 IPRFFIEEQLANGSLVIPFHSTFTSPYVYYLLTPKSPSLPLKVQAFIEWML 287
           +     + ++  G LV PF+    S   +YL+   S +   K+ AF +W+L
Sbjct: 239 VNNVMAQTEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWIL 289