Pairwise Alignments

Query, 297 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 301 a.a., Transcriptional regulator from Kangiella aquimarina DSM 16071

 Score =  172 bits (437), Expect = 6e-48
 Identities = 113/292 (38%), Positives = 159/292 (54%), Gaps = 9/292 (3%)

Query: 1   MFTSLPPLNALRAFESAARLQSITLASKELHVTHGAISKQIRVLEDFLGFALFVRLHKKV 60
           M   LPPLN+LRAFE+AAR  S T A++EL VT  AIS QI+ LEDFLG  LF+R ++K+
Sbjct: 1   MSRRLPPLNSLRAFEAAARHLSFTKAAEELFVTQAAISHQIKALEDFLGVQLFIRRNRKL 60

Query: 61  ELTDEAKRYFPHVQAALQTLSSATADLRSQGSRPQTLAINVLPSLTINWLIPRMEQFKSR 120
            LTDE + Y+P ++   + L +AT  +++QG+   +L + V+P+    WLIPR+ +F   
Sbjct: 61  LLTDEGQLYWPKIRDIFEKLVNATEQVKAQGA-TGSLTVCVIPTFATLWLIPRLAEFGEL 119

Query: 121 YPHLYVDLSIGDFAVDFSQGRYDIAIRSSTKLPKGVNYIKLMDEDLCLVCAPSLAPK--L 178
           +P + V +   D  VDF +   DIAI        G+    L +E L  VC+P    K  L
Sbjct: 120 HPEIEVRIKASDVEVDFVREDIDIAIYYGKGEYDGLCCDVLFEEHLTPVCSPDFPQKKNL 179

Query: 179 QCIEDINHVTLLKHTTRPELWDYW---AEKVGLVLTQEQTFGVEHFYMLSQAAASGMGAA 235
           +  ED+ +VTLL H    E W  W   A+  G+ L     F   H  M+ QAA  G G A
Sbjct: 180 KTPEDLKNVTLL-HDASTEEWRTWLKSADVTGVNLDHGPVF--SHSGMVLQAARHGQGIA 236

Query: 236 LIPRFFIEEQLANGSLVIPFHSTFTSPYVYYLLTPKSPSLPLKVQAFIEWML 287
           +      +  +  G L+ PF     S Y Y L+ P++     KV AF EW+L
Sbjct: 237 MGHSVLSQMDIETGRLIAPFDIVVDSGYSYDLVCPENSYDRPKVVAFREWLL 288