Pairwise Alignments

Query, 297 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 308 a.a., transcriptional regulator, LysR family from Agrobacterium fabrum C58

 Score =  160 bits (404), Expect = 4e-44
 Identities = 97/285 (34%), Positives = 152/285 (53%), Gaps = 3/285 (1%)

Query: 5   LPPLNALRAFESAARLQSITLASKELHVTHGAISKQIRVLEDFLGFALFVRLHKKVELTD 64
           LP L+ L AFE+A+R  S+T A++EL +T GA+S+QI  LE+ LG ALF+R  + + LT 
Sbjct: 9   LPSLSLLAAFEAASRTGSVTAAARELGLTQGAVSRQILALEEQLGVALFLRERQTIRLTR 68

Query: 65  EAKRYFPHVQAALQTLSSATADLRSQGSRPQTLAINVLPSLTINWLIPRMEQFKSRYPHL 124
             + Y   ++ AL+ +S+A+ +LR+      TL + VLPS    WL+PR+  F +R+P +
Sbjct: 69  AGEGYAREIREALRRISTASLNLRANPD-GGTLNLGVLPSFGTRWLVPRLPDFIARHPGI 127

Query: 125 YVDLSIGDFAVDFSQGRYDIAIRSSTKLPKGVNYIKLMDEDLCLVCAPSLAP--KLQCIE 182
            V+L       DF     D AI        G     LM E +  VC+P+      L   +
Sbjct: 128 SVNLLTRSSLFDFRTDTVDAAIHFGLPHWPGTELAFLMHEKVIPVCSPAFKELYGLSRPD 187

Query: 183 DINHVTLLKHTTRPELWDYWAEKVGLVLTQEQTFGVEHFYMLSQAAASGMGAALIPRFFI 242
           D+ HV LL  TTRP+ W+ W     +          + F  +++A+++G+GA+L+P F I
Sbjct: 188 DLLHVPLLHMTTRPDAWEQWFRSHDVRFDNVHGMLFDQFTTIAEASSAGVGASLVPSFMI 247

Query: 243 EEQLANGSLVIPFHSTFTSPYVYYLLTPKSPSLPLKVQAFIEWML 287
           EE+L +G LV        S   YYL      +    +++F  W++
Sbjct: 248 EEELRSGRLVSAVAGEVESEEAYYLACMPDRATYPPLESFRRWIV 292