Pairwise Alignments

Query, 297 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 300 a.a., transcriptional regulator, LysR family from Agrobacterium fabrum C58

 Score =  168 bits (426), Expect = 1e-46
 Identities = 106/292 (36%), Positives = 160/292 (54%), Gaps = 8/292 (2%)

Query: 1   MFTSLPPLNALRAFESAARLQSITLASKELHVTHGAISKQIRVLEDFLGFALFVRLHKKV 60
           M T LP L  L+AFE+AAR +S+TLAS EL+VT GA+S QIR LE  LG  LF R  + +
Sbjct: 1   MATELPSLKGLQAFEAAARYRSVTLASNELNVTPGAVSLQIRELEARLGVQLFFRKPRSI 60

Query: 61  ELTDEAKRYFPHVQAALQTLSSATADLRSQGSRPQTLAINVLPSLTINWLIPRMEQFKSR 120
           +LT E +RY+  ++ A + +  ATA+L ++ S    L ++  P+  + WL+PR+  F+ +
Sbjct: 61  QLTREGERYYGALRTAFRMMREATAELTAR-SEITVLTLSCTPTFAVQWLMPRLPSFQQQ 119

Query: 121 YPHLYVDLSIGDFAVDFSQGRYDIAIRSSTKLPKGVNYIKLMDEDLCLVCAPSLAPK--- 177
           +PH+ V +S+ +  VDFS+   D+A+R      +G+  I+ +D+    VCAP L  K   
Sbjct: 120 HPHVDVRISVTNRLVDFSRDDVDLAVRHGFGRYEGLESIRFIDDSTLPVCAPQLLEKYGP 179

Query: 178 LQCIEDINHVTLLKHTTRPELWDYWAEKVGL--VLTQEQTFGVEHFYMLSQAAASGMGAA 235
           L+   D+  V LL    R E W  W E  G   V     T  ++    L  AA +G G A
Sbjct: 180 LREAGDLKSVPLLHDENRNE-WRRWLEAAGASEVDASGGTVFIDSNGAL-DAAKAGHGIA 237

Query: 236 LIPRFFIEEQLANGSLVIPFHSTFTSPYVYYLLTPKSPSLPLKVQAFIEWML 287
           L  R  +  +L  G+L+ PF +   S   Y+L+ P+       +   I+WML
Sbjct: 238 LTRRSLVSRELVEGALIAPFGTDMASTLAYFLVYPRRMLDNPDLVTLIDWML 289