Pairwise Alignments

Query, 256 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 253 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  130 bits (328), Expect = 2e-35
 Identities = 86/247 (34%), Positives = 123/247 (49%), Gaps = 14/247 (5%)

Query: 11  ALLFGVAMVAGFIDSIAGGGGLLTIPAL--MWAGLPPAVALGTNKLQACGGSFFASLYFV 68
           A+L   A  AG ID+  GGGGL+ IPAL  +     PA  LG+NKL +  G+ FA+  F+
Sbjct: 5   AVLSVFAFAAGLIDAAVGGGGLIQIPALFNVLPSAQPAALLGSNKLASVCGTAFAARSFI 64

Query: 69  RKGLVDLKTVKLALFCAFIGAALGTVLVQLVDTKILELVLPFLILAIGCYFLFSKKVSEE 128
           RK  +D   +  A   AF+ +  G   V LV   ++   +  LI+ +  Y  F KK    
Sbjct: 65  RKVTLDWGLIVPAALSAFVMSFAGAATVSLVPPSVMRPAVLVLIVLMAVY-TFCKK---- 119

Query: 129 DRHQVLTPT-------VFAFTAALGVGLYDGFFGPGTGSFFALAFVTLAGFGLAKATAHA 181
           D   + TP          A      +G YDG FGPGTGSF    F+         A+A A
Sbjct: 120 DFGTLHTPAQVGRKEQCLAVLIGGAIGFYDGLFGPGTGSFLIFLFIRFFALDFLHASASA 179

Query: 182 KVLNFSTNIASLIFFALGGKVIWLLGLVMLAGQAIGATLGSRLVVTKGTKIIKPLVVTMS 241
           KV+N +TN+A+L+FF   G V++ + L M     +GA  G+ L V KG   ++ L + + 
Sbjct: 180 KVVNIATNLAALVFFVPTGNVLYAIALPMAVCNILGALTGTWLAVRKGAGFVRGLFLVLL 239

Query: 242 LAMSLKL 248
             +  KL
Sbjct: 240 CVLIAKL 246