Pairwise Alignments

Query, 256 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 269 a.a., TauE/TSUP family inner membrane protein from Escherichia coli BL21

 Score =  277 bits (709), Expect = 1e-79
 Identities = 142/247 (57%), Positives = 178/247 (72%)

Query: 3   FELTLQVAALLFGVAMVAGFIDSIAGGGGLLTIPALMWAGLPPAVALGTNKLQACGGSFF 62
           F ++  +  +LF VAM+AGFIDSIAGGGGLLTIPALM AG+ PA AL TNKLQACGGS  
Sbjct: 8   FMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQACGGSIS 67

Query: 63  ASLYFVRKGLVDLKTVKLALFCAFIGAALGTVLVQLVDTKILELVLPFLILAIGCYFLFS 122
           A++YF+R+ +V L   KL +   F+G+  G +LVQ V   +L  +LP L++ IG YFL  
Sbjct: 68  ATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYFLLM 127

Query: 123 KKVSEEDRHQVLTPTVFAFTAALGVGLYDGFFGPGTGSFFALAFVTLAGFGLAKATAHAK 182
            K+ EEDR + +    FA  A   VG YDGFFGP  GSF+ALAFVTL GF LAKATAHAK
Sbjct: 128 PKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLAKATAHAK 187

Query: 183 VLNFSTNIASLIFFALGGKVIWLLGLVMLAGQAIGATLGSRLVVTKGTKIIKPLVVTMSL 242
           +LN ++NI  L+ F LGGKVIW  G VML GQ +GA +GSRLV++KG K+I+P++V +S 
Sbjct: 188 LLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRPMIVIVSA 247

Query: 243 AMSLKLL 249
            MS KLL
Sbjct: 248 VMSAKLL 254